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CDS Information : RER_05790

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close this sectionGenomic map

Display Clone

Rhodococcus erythropolis PR4 (= NBRC 100887) chromosome

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Overview 
Genome
Clone

close this sectionLocation

Organism Rhodococcus erythropolis PR4 (= NBRC 100887)
Replicon chromosome
Start / Stop / Direction 650,882 / 652,570 / +
Location 650882..652570
Type CDS
Length 1,689 bp (562 aa)

close this sectionAnnotation

Product putative oxidoreductase
Gene name
Functional category Unclassified
- putative function (general)
EC number
Note Similar to the tryptophan 2-monooxygenase (EC 1.13.12.3) of plasmid pIAA1 of Pseudomonas syringae pv. savastanoi (P06617).
KEGG pathway
Sequence feature
References Uniprot:P06617 Pubmed:12051679

close this sectionComputational search results

BLASTP
Database:UniProtKB:14.0
1E=0Q0SAV2_RHOSRTryptophan 2-monooxygenaseAlignment
2E=0Q9L105_STRCOPutative amino oxidaseAlignment
3E=0Q827N1_STRAWPutative amino oxidaseAlignment
4E=0Q6F499_STRGRPutative amino oxidaseAlignment
5E=0B1W482_STRGGPutative amino oxidaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:18.0
IPR002937 Amine oxidase (Domain)
 [59-534]  7e-39 PF01593
PF01593   Amino_oxidase
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 562 amino acids
molecular mass 62,484.40 Da
pI 4.62
aa composition
AlaValLeuIlePheTrpProMetGlySer
7.1
(40aa)
6.9
(39aa)
8.9
(50aa)
5.2
(29aa)
4.3
(24aa)
2.3
(13aa)
6.8
(38aa)
2.8
(16aa)
8.7
(49aa)
6
(34aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
6.9
(39aa)
0.4
(2aa)
2.7
(15aa)
2.8
(16aa)
3
(17aa)
2.3
(13aa)
3
(17aa)
5.9
(33aa)
7.5
(42aa)
6.4
(36aa)

open this sectionSequence

close this sectionCovered clones

NBRC No. clone name start stop length(bp)
G12-001-026 REGR1S7017G08 621,886 666,189 44,304

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.