CDS Information : RER_09730

Display	1000bp 10000bp 100000bp Clone

Rhodococcus erythropolis PR4 (= NBRC 100887) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Rhodococcus erythropolis PR4 (= NBRC 100887)
Replicon	chromosome
Start / Stop / Direction	1,070,368 / 1,071,171 / +
Location	1070368..1071171
Type	CDS
Length	804 bp (267 aa)

Product	putative hydrolase
Gene name
Functional category	Unclassified - putative function (general)
EC number
Note
KEGG pathway
Sequence feature
References	Uniprot:O73957 Pubmed:9785454

BLASTP Database:UniProtKB:14.0 show BLAST table	1 E=1e-122 Q0S7I7_RHOSR Hydrolase Alignment 2 E=1e-104 Q5Z2E7_NOCFA Putative hydrolase Alignment 3 E=2e-85 A4FD56_SACEN Alpha/beta hydrolase fold Alignment 4 E=1e-76 A8LCY0_FRASN Alpha/beta hydrolase fold Alignment 5 E=1e-72 A3KFG8_9ACTO LipE Alignment
HAMAP	No significant hit
InterPro Database:interpro:18.0	IPR000073 Alpha/beta hydrolase fold-1 (Domain) PF00561   Abhydrolase_1
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	267 amino acids
molecular mass	28,617.73 Da
pI	5.58
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 12.7 (34aa) 7.9 (21aa) 8.2 (22aa) 5.2 (14aa) 3.7 (10aa) 0.7 (2aa) 5.6 (15aa) 4.1 (11aa) 10.1 (27aa) 4.5 (12aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 5.6 (15aa) 1.1 (3aa) 1.9 (5aa) 2.6 (7aa) 2.6 (7aa) 2.2 (6aa) 2.6 (7aa) 6.7 (18aa) 7.5 (20aa) 4.1 (11aa)

>RER_09730 putative hydrolase
ATGACGGTCGCCACAATCAACGGAATCCCCATCAATTACCAGGTCAAGGGTGATGGAGAT
CTGGTGGTGCTCATCATGGGGACCGGCAGCCCCGGCCGCGTCTGGGATCTGCACCAGACC
CCGGCGCTGGTGGCCGCCGGCTACCGAGTCTGCACCTTCGACAACCGCGGAATCGCACCG
TCCGGTGAGAGCCTCGGCGGCATCACGATGCCCGACATGGTCGCGGACACCGCCGGACTG
ATCGAGCACCTCGGTGGCGGCCCCGCCCATGTGATCGGAACCTCGATGGGCGCCCGGGTA
GCACAGGAACTGACGCTCGCCAGGCCCGATCTGGTTCGCAAAGCAGTGTTCCTCGCCGGC
CACGCCCGGATGGATCATTTCCAGCAGGTCCTGACCGAGGGTGAGCGCCAGTTGTTCGAC
AGTGGCGTCGCTCTGCCGGCCAAATACCGTGCCGCAGTGACCGCGGTGATGAACCTTTCG
CCGGCCACGCTGGCAGACGATCACTCCGCGCGCGACTGGATGGATATCTTCGAGTTCACC
GGCGGCGCAACGTCACCGGGTGTTCGCGCACAGCTCGGTATGGACCGCGCCTTCGATCGA
CGGGGTGCGTACAAGTCGATCATGCGCCCCTGCCTGTCCGTCGCTTTCGCCGACGACCGC
ATGATCCCGCCCTACCTCTCCCGCGAGGTGGCGGACTGCATCGCGACGGCGTCGTTCGAA
GAGATTCCCGACGCCGGACACTACGGGTACCTCGAGCGTCCGGAGGCCGTGAACAAGGTG
CTGATCGACTTCCTGGCGAAGTAG


>RER_09730 putative hydrolase
MTVATINGIPINYQVKGDGDLVVLIMGTGSPGRVWDLHQTPALVAAGYRVCTFDNRGIAP
SGESLGGITMPDMVADTAGLIEHLGGGPAHVIGTSMGARVAQELTLARPDLVRKAVFLAG
HARMDHFQQVLTEGERQLFDSGVALPAKYRAAVTAVMNLSPATLADDHSARDWMDIFEFT
GGATSPGVRAQLGMDRAFDRRGAYKSIMRPCLSVAFADDRMIPPYLSREVADCIATASFE
EIPDAGHYGYLERPEAVNKVLIDFLAK

NBRC No.	clone name	start	stop	length(bp)
G12-001-042	REGR1S7013A02	1,033,679	1,075,766	42,088
G12-001-043	REGR1S8020B06	1,065,057	1,107,108	42,052

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.