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CDS Information : RER_30340

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close this sectionGenomic map

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Rhodococcus erythropolis PR4 (= NBRC 100887) chromosome

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Overview 
Genome

close this sectionLocation

Organism Rhodococcus erythropolis PR4 (= NBRC 100887)
Replicon chromosome
Start / Stop / Direction 3,247,790 / 3,250,567 / +
Location 3247790..3250567
Type CDS
Length 2,778 bp (925 aa)

close this sectionAnnotation

Product phosphoenolpyruvate carboxylase
Gene name ppc
Functional category Metabolism
- Carbohydrate Metabolism
EC number 4.1.1.31
Note
KEGG pathway map:00620 KO:K01595
Sequence feature
References Uniprot:Q9RNU9 Pubmed:8328954
Uniprot:P12880 Pubmed:2666264

close this sectionComputational search results

BLASTP
Database:UniProtKB:14.0
1E=0Q0S0J1_RHOSRPhosphoenolpyruvate carboxylaseAlignment
2E=0A3PZA5_MYCSJPhosphoenolpyruvate carboxylaseAlignment
3E=0A1UFP3_MYCSKPhosphoenolpyruvate carboxylaseAlignment
4E=0Q1B9B8_MYCSSPhosphoenolpyruvate carboxylaseAlignment
5E=0CAPP_MYCS2Phosphoenolpyruvate carboxylase
PEPCase
PEPC
Alignment
HAMAP
Database:HAMAP:20080521
 [15-925]  19.324 MF_00595
MF_00595   CAPP
InterPro
Database:interpro:18.0
IPR001449 Phosphoenolpyruvate carboxylase (Family)
 [3-925]  2.5e-104 PF00311
PF00311   PEPcase
 [148-159]  PS00781
PS00781   PEPCASE_1
 [578-590]  PS00393
PS00393   PEPCASE_2
IPR015813 Pyruvate/Phosphoenolpyruvate kinase, catalytic core (Domain)
 [20-925]  2.4e-294 SSF51621
SSF51621   Phosphoenolpyruvate/pyruvate domain
 [169-686]  5.9e-126 G3DSA:3.20.20.60
G3DSA:3.20.20.60   no description
IPR018129 Phosphoenolpyruvate carboxylase, active site (Active_site)
 [148-159]  PS00781
PS00781   PEPCASE_1
 [578-590]  PS00393
PS00393   PEPCASE_2
IPR021135 Phosphoenolpyruvate carboxylase, C-terminal region (Region)
 [3-925]  2.5e-104 PF00311
PF00311   PEPcase
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 925 amino acids
molecular mass 101,862.16 Da
pI 4.84
aa composition
AlaValLeuIlePheTrpProMetGlySer
11.6
(107aa)
6.3
(58aa)
11.9
(110aa)
5.5
(51aa)
2.4
(22aa)
1.1
(10aa)
4.2
(39aa)
1.7
(16aa)
7.1
(66aa)
6.6
(61aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
6.4
(59aa)
0.2
(2aa)
2.1
(19aa)
2.3
(21aa)
2.6
(24aa)
1.5
(14aa)
1.8
(17aa)
9.7
(90aa)
6.7
(62aa)
8.3
(77aa)

open this sectionSequence