CDS Information : RER_36500

Display	1000bp 10000bp 100000bp Clone

Rhodococcus erythropolis PR4 (= NBRC 100887) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Rhodococcus erythropolis PR4 (= NBRC 100887)
Replicon	chromosome
Start / Stop / Direction	3,994,261 / 3,992,690 / -
Location	complement(3992690..3994261)
Type	CDS
Length	1,572 bp (523 aa)

Product	probable carboxylesterase
Gene name
Functional category	Unclassified - putative function (general)
EC number	3.1.1.1
Note	Similar to the cell wall-associated carboxylesterase MT2282 (Rv2224c) of Mycobacterium tuberculosis (P65823).
KEGG pathway
Sequence feature
References	Uniprot:Q54410 Pubmed:7487044 Uniprot:P65823 Pubmed:17428787

BLASTP Database:UniProtKB:14.0 show BLAST table	1 E=0 Q0SHJ1_RHOSR Possible proteinase Alignment 2 E=1e-179 Q5YZ86_NOCFA Putative hydrolase Alignment 3 E=1e-148 B1MNV0_MYCAB Putative uncharacterized protein Alignment 4 E=1e-142 A3Q1U2_MYCSJ Tripeptidyl-peptidase B. Serine peptidase. MEROPS family S33 precursor Alignment 5 E=1e-142 A1UIC8_MYCSK Tripeptidyl-peptidase B. Serine peptidase. MEROPS family S33 precursor Alignment
HAMAP	No significant hit
InterPro Database:interpro:18.0	IPR013595 TAP-like protein (Domain) PF08386   Abhydrolase_4
SignalP	Bacteria, Gram-positive
TMHMM	No significant hit
SOSUI	Transmembrane 1

size of protein	523 amino acids
molecular mass	54,855.72 Da
pI	3.94
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 11.5 (60aa) 8.2 (43aa) 8.8 (46aa) 2.1 (11aa) 3.3 (17aa) 0.6 (3aa) 6.5 (34aa) 1.5 (8aa) 10.5 (55aa) 6.9 (36aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 6.5 (34aa) 2.1 (11aa) 2.1 (11aa) 4.6 (24aa) 2.9 (15aa) 1.9 (10aa) 0.6 (3aa) 4.6 (24aa) 9.4 (49aa) 5.5 (29aa)

>RER_36500 probable carboxylesterase
ATGTCGAAGTTCGTTCGCCTCTCCGGTGCCCTCGCCGGAAGCGCAGCAGTGCTCGTGTTG
GTTGTCGGTTGCACCAGTTCGCAAGGCACGCCCGAATCAGTGGAACCTGCTGGTTCTGCC
GCGTCCGCGGTGCCGTCCGGCCTCGAGAAATTCTACGAGCAGTCGCTCGACTGGGGTTCG
TGCGACCAATTTGTCGAAGAAGGAACTGCGCCGCTGGGGCGTGGGGTCGACTGCGCCGAG
GTGAGCGTTCCCGTCGACTACGCGAATCCGAACGGCGACACCGCGAAGGTGGTGATCTCG
CGTTCGAAGGCAACCGGCGACCGCATCGGCTCACTGTTGCTGAACCCCGGCGGGCCGGGT
GGGTCCGGGCTGTCGATGGCGACATCGGGTTCGGGCACCGAACTGCAGGAACGTTTCGAC
ATGATCGGCTTCGATCCGCGGGGGATCGGGGCATCGACCCCGCAGGTTCGGTGTTTGACG
CCGGAGGAGACCGACGCGGAGCGTGCGGAGGTCAACGTCGACATGACGCCGGAGGGCATC
GCTCTCGCCGAGGCGGACAGCAAGGACTACGCCGCCAAGTGCGCTGAGCGGACCGGTACG
GAGTTCCTCGCTCATGTCGGTACCTACGAGGTGGTGCGAGATATGGACGTCATTCGGGGC
GTTCTCGGCGATCCGAAGATGAACTACCTCGGGTTCTCGTACGGGACCCGGCTCGGATCC
ACGTACGCGGAAACCTTTCCGCAGAACGTCCGAGCGATGGTCCTCGACGGCGCGCTCGAC
CCCGAGCAGGATCCGGTCGACGAAGTGGTCTTGCAGGGGCAGGGCTTCCAAGGCGCGTTC
GACGCCTTTGTCGCCGACTGTGTCTCGCGAACGGATTGCCCGCTGGGTGATGATCCGGCG
CAGGCGCAGGCACGCTTTCAGGCACTCGTCGATCCGTTGATCGAGAAGCCGGCACAGACC
ACCGATCCGCGCGGGCTGAGTTATTCCGACGCGATCACGGGCGTGCAGCAGGCTCTGTAT
TCGCCACAGTTGTGGACGCCGCTGCGTGGGGGTCTGTCGAGTCTGGCCGACGGACGTGGC
GACTCGCTGCTCAATCTCGCCGACATGTACGAAGGCCGTGAGGATGACGGCAGCTACTCC
AACATCAACGACGCGTTCAACGCCATTCGCTGCGTGGACGATCCGGCAACCACCGACCGC
GCCGAGGCCGGCGAATCCGACACTCGGTACCGCGAGGCGGCGCCGTTCCTCGACGACGGC
CGCGGGACGGGTCAAGCGCCGCTCGACCTGTGCGCGTTCTGGCCCGTTCCGGCTACCGGC
AGCCCCCACGCGCTCGACCCCCAGGCGCTCGCCGATGCCGGCCTGCCTCAGTTGGTCGTC
GTCTCCACGACGCAGGATCCGGCAACGCCGTATCAGGCCGGAGTGGATCTCGCCAAGCAG
TTGGGCGCTGCCCTGATCACGTTCGACGGAACCCAACACACGGTGGTTCTGGACGGAAAC
TCCTGCGTCGACGATGCCGTCGTCGACTACTTCGTTTACTTGAAGGCGCCGGAAGAGGGT
CTGACATGTTAA


>RER_36500 probable carboxylesterase
MSKFVRLSGALAGSAAVLVLVVGCTSSQGTPESVEPAGSAASAVPSGLEKFYEQSLDWGS
CDQFVEEGTAPLGRGVDCAEVSVPVDYANPNGDTAKVVISRSKATGDRIGSLLLNPGGPG
GSGLSMATSGSGTELQERFDMIGFDPRGIGASTPQVRCLTPEETDAERAEVNVDMTPEGI
ALAEADSKDYAAKCAERTGTEFLAHVGTYEVVRDMDVIRGVLGDPKMNYLGFSYGTRLGS
TYAETFPQNVRAMVLDGALDPEQDPVDEVVLQGQGFQGAFDAFVADCVSRTDCPLGDDPA
QAQARFQALVDPLIEKPAQTTDPRGLSYSDAITGVQQALYSPQLWTPLRGGLSSLADGRG
DSLLNLADMYEGREDDGSYSNINDAFNAIRCVDDPATTDRAEAGESDTRYREAAPFLDDG
RGTGQAPLDLCAFWPVPATGSPHALDPQALADAGLPQLVVVSTTQDPATPYQAGVDLAKQ
LGAALITFDGTQHTVVLDGNSCVDDAVVDYFVYLKAPEEGLTC

NBRC No.	clone name	start	stop	length(bp)
G12-001-157	REGR1S7001A03	3,956,485	4,000,476	43,992
G12-001-158	REGR1S7007C03	3,986,639	4,030,492	43,854

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.