CDS Information : RER_39030

Display	1000bp 10000bp 100000bp Clone

Rhodococcus erythropolis PR4 (= NBRC 100887) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Rhodococcus erythropolis PR4 (= NBRC 100887)
Replicon	chromosome
Start / Stop / Direction	4,284,024 / 4,283,590 / -
Location	complement(4283590..4284024)
Type	CDS
Length	435 bp (144 aa)

Product	conserved hypothetical protein
Gene name
Functional category	Unclassified - hypothetical protein
EC number
Note
KEGG pathway
Sequence feature
References

BLASTP Database:UniProtKB:14.0 show BLAST table	1 E=7e-56 Q0SGQ1_RHOSR Putative uncharacterized protein Alignment 2 E=3e-42 Q5Z0X9_NOCFA Putative uncharacterized protein Alignment 3 E=9e-38 Q73X61_MYCPA Putative uncharacterized protein Alignment 4 E=2e-37 A4KGN3_MYCTU Conserved hypothetical secreted protein Alignment 5 E=2e-37 Y1312_MYCTU Uncharacterized protein Rv1312/MT1352 Alignment
HAMAP	No significant hit
InterPro	No significant hit
SignalP	Bacteria, Gram-positive
TMHMM	Transmembrane 1
SOSUI	Transmembrane 1

size of protein	144 amino acids
molecular mass	15,855.34 Da
pI	10.51
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 7.6 (11aa) 9.7 (14aa) 11.8 (17aa) 6.3 (9aa) 4.9 (7aa) 1.4 (2aa) 4.2 (6aa) 2.1 (3aa) 9 (13aa) 10.4 (15aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 4.9 (7aa) 0 (0aa) 0.7 (1aa) 0.7 (1aa) 2.1 (3aa) 1.4 (2aa) 0.7 (1aa) 11.8 (17aa) 6.3 (9aa) 4.2 (6aa)

>RER_39030 conserved hypothetical protein
GTGACATTCGGAATGACTGTGTTGATCATTCTGGTTGTGCTGCTCGCGGTTCTCGTCGCG
GCTTTTCTGTATCGTCTGCTGGTTCTACGTCGCGGCGGTACCGCTGCACTGCTTCGTGTT
CTGCCATCCCCGGGGGACAGCGGGTGGCGTCACGGAATCATTCGCTACGGCGAAAGCACC
TTCGTCTTTTTCAAACTGTCGAGTCTGCGGCCGGGCCCGGACTCCAGGATTGATCGTCAA
GGAATCGAGGTCGAGAGCCGTCGCTCTCCCTCGGGTACCGAATTCGACATCATGAGCGAC
GACATCGTCGTGGTCAAGGTCAACGACGGATCGTCGGCCTACGAAATCGCCTTGGACAGT
GGAGCATTGACAGCTTTCCTGTCCTGGGTCGAATCACGGCCGGACGGGCGCGCCCGTAGG
CGACGCACCGCCTGA


>RER_39030 conserved hypothetical protein
MTFGMTVLIILVVLLAVLVAAFLYRLLVLRRGGTAALLRVLPSPGDSGWRHGIIRYGEST
FVFFKLSSLRPGPDSRIDRQGIEVESRRSPSGTEFDIMSDDIVVVKVNDGSSAYEIALDS
GALTAFLSWVESRPDGRARRRRTA

NBRC No.	clone name	start	stop	length(bp)
G12-001-168	REGR1S8011B02	4,252,126	4,295,916	43,791
G12-001-169	REGR1S7018G07	4,274,552	4,317,871	43,320

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.