CDS Information : RER_42800

Display	1000bp 10000bp 100000bp Clone

Rhodococcus erythropolis PR4 (= NBRC 100887) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Rhodococcus erythropolis PR4 (= NBRC 100887)
Replicon	chromosome
Start / Stop / Direction	4,701,771 / 4,700,806 / -
Location	complement(4700806..4701771)
Type	CDS
Length	966 bp (321 aa)

Product	putative phosphatase
Gene name
Functional category	Unclassified - putative function (general)
EC number
Note
KEGG pathway
Sequence feature
References	Uniprot:Q9ZN70 Pubmed:10382967

BLASTP Database:UniProtKB:14.0 show BLAST table	1 E=1e-136 Q0S4H8_RHOSR Phosphatase, Ppx/GppA family protein Alignment 2 E=1e-120 Q5YQ33_NOCFA Putative exopolyphosphatase Alignment 3 E=1e-114 B1MKG4_MYCAB Putative uncharacterized protein Alignment 4 E=1e-110 Q1B442_MYCSS Ppx/GppA phosphatase Alignment 5 E=1e-110 A3Q5F4_MYCSJ Ppx/GppA phosphatase Alignment
HAMAP	No significant hit
InterPro Database:interpro:18.0	IPR003695 Ppx/GppA phosphatase (Domain) PF02541   Ppx-GppA IPR003695 Ppx/GppA phosphatase (Family) PF02541   Ppx-GppA
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	321 amino acids
molecular mass	33,570.16 Da
pI	4.45
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 14.6 (47aa) 11.8 (38aa) 6.2 (20aa) 5.3 (17aa) 3.4 (11aa) 0.3 (1aa) 4 (13aa) 2.8 (9aa) 9.7 (31aa) 4.7 (15aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 8.4 (27aa) 1.2 (4aa) 0.6 (2aa) 2.2 (7aa) 0.9 (3aa) 1.6 (5aa) 1.6 (5aa) 6.9 (22aa) 5.9 (19aa) 7.8 (25aa)

>RER_42800 putative phosphatase
GTGACTCGCCGTGTTGCCGCAGTCGATTGCGGTACCAACTCCATTCGACTGCTGATCGCC
GACGTCGGCGCCGACGGCCGTCTGGTGGATGTCCGGCGCGAGATGCGCGTCGTGCGACTG
GGTCAAGGTGTTGATGCGACAGGGACATTCGCGCCCGAGGCCATCGAACGCACCCGGGTC
GCGCTGGTCGAGTACGCGTCGATGATCGCCGATGCCGGAGCAACCGCCGTTCGAATGGTC
GCGACGTCGGCTACTCGCGACGCTGCGAATCGGGAAGGCTTCTTCACGATGACGCGGGAC
GTGCTCGGTGCGGTGATTCCCGGATCCGGAGCGGAGGTGATCACCGGCGACGAAGAGGCG
CGACTCTCGTTCGGTGGTGCTGTGGGAGAACTTGATCCCTCCGAGGGCCCCTTCGTGGTA
GTCGATCTCGGCGGAGGGTCCACCGAAGTTGTCCTCGGCGACGCGTCGGGCGTCCAGGCT
GCGTACTCCACCGACATCGGCTGTGTGCGCGTCACTGAGCGATGCCTACCGTCGGATCCG
CCTACGGCAGAGCAGGTTTCCGAGGCGACGGCTTTTGCGACCGCGAAATTGGCCGAGGCA
TTCGAGGCCGTGCCCGTCGAGAAGGCGCACACCTGGGTGGGTGTCGCTGGAACCATGACG
ACGCTGGCCGCGATTGCTCAGGAACTTCCGGAGTACGACGCCGAGAAGGTGCACCTGTCG
AGGATTTCGTTCAAGCAACTTTTCGAGGTGTGCGAGCGACTTACCGCCATGCCTCGGGTT
GATCGCGCCGCCTTCGGCCCGATGCATCCGGGGCGGGTGGACGTCATCGGCGGCGGAGCG
ATCATCACCACGGTGCTGGCTCAGACATTCGAAGCCAAAGCCGGGATCACCGAACTGGTT
GTCAGCGAACACGACATCCTCGACGGCATCGCGATGTCGATAGCTCAGACCCACCCGATA
GTCTGA


>RER_42800 putative phosphatase
MTRRVAAVDCGTNSIRLLIADVGADGRLVDVRREMRVVRLGQGVDATGTFAPEAIERTRV
ALVEYASMIADAGATAVRMVATSATRDAANREGFFTMTRDVLGAVIPGSGAEVITGDEEA
RLSFGGAVGELDPSEGPFVVVDLGGGSTEVVLGDASGVQAAYSTDIGCVRVTERCLPSDP
PTAEQVSEATAFATAKLAEAFEAVPVEKAHTWVGVAGTMTTLAAIAQELPEYDAEKVHLS
RISFKQLFEVCERLTAMPRVDRAAFGPMHPGRVDVIGGGAIITTVLAQTFEAKAGITELV
VSEHDILDGIAMSIAQTHPIV

NBRC No.	clone name	start	stop	length(bp)
G12-001-186	REGR1S8012H04	4,684,788	4,721,879	37,092

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.