CDS Information : RER_45820

Display	1000bp 10000bp 100000bp Clone

Rhodococcus erythropolis PR4 (= NBRC 100887) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Rhodococcus erythropolis PR4 (= NBRC 100887)
Replicon	chromosome
Start / Stop / Direction	5,020,631 / 5,019,636 / -
Location	complement(5019636..5020631)
Type	CDS
Length	996 bp (331 aa)

Product	hypothetical membrane protein
Gene name
Functional category	Unclassified - hypothetical protein
EC number
Note
KEGG pathway
Sequence feature
References

BLASTP Database:UniProtKB:14.0 show BLAST table	1 E=1e-106 Q0SE02_RHOSR Possible membrane protein Alignment 2 E=6e-76 Q9RCV5_STRCO Putative integral membrane protein Alignment 3 E=3e-72 Q4JXI1_CORJK Putative membrane protein Alignment 4 E=1e-64 A3PTP3_MYCSJ Putative uncharacterized protein precursor Alignment 5 E=1e-64 A1UA40_MYCSK Putative uncharacterized protein precursor Alignment
HAMAP	No significant hit
InterPro	No significant hit
SignalP	Bacteria, Gram-positive
TMHMM	Transmembrane 6
SOSUI	Transmembrane 7

size of protein	331 amino acids
molecular mass	33,199.95 Da
pI	5.28
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 16.9 (56aa) 10.3 (34aa) 13.6 (45aa) 4.5 (15aa) 3.3 (11aa) 0.9 (3aa) 5.7 (19aa) 3 (10aa) 11.8 (39aa) 5.1 (17aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 6 (20aa) 0.6 (2aa) 2.4 (8aa) 1.8 (6aa) 0.3 (1aa) 2.7 (9aa) 0.9 (3aa) 3 (10aa) 3.6 (12aa) 3.3 (11aa)

>RER_45820 hypothetical membrane protein
ATGAACGCCGAAGTTGAAGCACGGGACCGCAAGAAGTTGGTGGCTGTGGTGTTGGGCTTG
TCCGCCGTGATCGGGCTGATGCTGCTTGCCTTCGTACTGCCCTCGGTCAACAGTGGCCCG
CACGAACTGAAGTTGGGCATCACCGGTCCAGCTGCGGCAACCGAACAGATCAGCACCTCG
CTCGAGGCGAGTAAGCAAGGCGCCTTCGATACTCGAGAATTCGCTGACGCCGACGCCCTG
CGTGACGCGATTCGGAATCGCGACGTGGTCGGCGGAATCGCCGTTGATGCCAACGGTCCT
CACGTGTTGATCGCGACTGCAGGCGGAACCCCGATCGCCCAGACCCTGACCGGGGTGGCC
AACGGCCTCTCGGAGGCCTCGGGGGCAAAGGTGCCTGTCGAAGACGTTGTGCCGCTGACT
GCGGACGACCCGACCGGTGCTGGGCTCACGGCATTGGCCTTGCCCTTGGTGTTCGGCGGA
ATCATGCCTGCTGTTGTTCTCGTGCAACTGTTTCCGCGGAGCATTGTCAAGCGAGTGTTG
GGCGCTGCCGGCGTCGCGGTTGTCGCGGGTTTTGCACTGACTGCCATTCTGCAGTTCGGC
ACCAACAGTCTTGACGGAAACTACCTGCTCACCGCGCTCGCACTCACCATGGGCATGTCG
GCCATCTCGCTGCCCATTCTGGGACTCGAATCCCTGCTCGGGATGAAGGGATTCGCGTTG
GGTGCCGTCACGATGATGTTCATCGGAAACCCACTCTCGGGGATGGCGACAACTGCCGCG
TGGTTGCCCGCAGGCTGGGGTGCATTGGGGCAGCTGCTCCCACCTGGCGCCGCAGGAGCA
TCCGTCCGTTCGATGGCGTTCTTCGACGGCCATGGCGCCGCCACGCCACTTCTGGTGCTG
GTGTGCTGGATTGCCGTCGGGATCGCGCTGTGCGTCGCCGCCGGCCGGAAGAAGGCGTCG
ACCCCCGTGGTCGAACCCGAGGCTGCGCTGGTCTAG


>RER_45820 hypothetical membrane protein
MNAEVEARDRKKLVAVVLGLSAVIGLMLLAFVLPSVNSGPHELKLGITGPAAATEQISTS
LEASKQGAFDTREFADADALRDAIRNRDVVGGIAVDANGPHVLIATAGGTPIAQTLTGVA
NGLSEASGAKVPVEDVVPLTADDPTGAGLTALALPLVFGGIMPAVVLVQLFPRSIVKRVL
GAAGVAVVAGFALTAILQFGTNSLDGNYLLTALALTMGMSAISLPILGLESLLGMKGFAL
GAVTMMFIGNPLSGMATTAAWLPAGWGALGQLLPPGAAGASVRSMAFFDGHGAATPLLVL
VCWIAVGIALCVAAGRKKASTPVVEPEAALV

NBRC No.	clone name	start	stop	length(bp)
G12-001-198	REGR1S8009G09	4,993,725	5,026,587	32,863
G12-001-199	REGR1S8017G11	5,017,871	5,050,980	33,110

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.