CDS Information : RER_45870

Display	1000bp 10000bp 100000bp Clone

Rhodococcus erythropolis PR4 (= NBRC 100887) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Rhodococcus erythropolis PR4 (= NBRC 100887)
Replicon	chromosome
Start / Stop / Direction	5,025,982 / 5,027,013 / +
Location	5025982..5027013
Type	CDS
Length	1,032 bp (343 aa)

Product	putative NADPH-dependent L-glyceraldehyde 3-phosphate reductase
Gene name
Functional category	Metabolism - Carbohydrate Metabolism
EC number
Note	Similar to the NADPH-dependent L-glyceraldehyde 3-phosphate reductase YghZ of Escherichia coli (Q46851).
KEGG pathway
Sequence feature
References	Uniprot:Q46851 Pubmed:12583903,18620424

BLASTP Database:UniProtKB:14.0 show BLAST table	1 E=1e-141 A4AEJ4_9ACTN Oxidoreductase Alignment 2 E=1e-136 A0LVM7_ACIC1 Aldo/keto reductase Alignment 3 E=1e-136 Q47MJ4_THEFY Oxidoreductase Alignment 4 E=1e-135 Q4KK30_PSEF5 Oxidoreductase, aldo/keto reductase family Alignment 5 E=1e-134 Q3KJR0_PSEPF Aldo/keto reductase Alignment
HAMAP	No significant hit
InterPro Database:interpro:18.0	IPR001395 Aldo/keto reductase (Family) PTHR11732   ALDO/KETO REDUCTASE SSF51430   NAD(P)-linked oxidoreductase PF00248   Aldo_ket_red G3DSA:3.20.20.100   no description PD000288   Q9EWJ0_STRCO_Q9EWJ0; IPR005399 KCNAB voltage-gated K+ channel, beta subunit (Family) PTHR11732:SF14   POTASSIUM CHANNEL BETA IPR023210 NADP-dependent oxidoreductase domain (Domain) G3DSA:3.20.20.100   no description SSF51430   NAD(P)-linked oxidoreductase PF00248   Aldo_ket_red
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	343 amino acids
molecular mass	37,339.78 Da
pI	4.61
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 12 (41aa) 4.7 (16aa) 12 (41aa) 5.5 (19aa) 2.6 (9aa) 2 (7aa) 4.4 (15aa) 1.5 (5aa) 8.2 (28aa) 10.2 (35aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 3.2 (11aa) 0 (0aa) 3.5 (12aa) 4.1 (14aa) 4.1 (14aa) 1.7 (6aa) 1.7 (6aa) 6.4 (22aa) 7.6 (26aa) 4.7 (16aa)

>RER_45870 putative NADPH-dependent L-glyceraldehyde 3-phosphate reductase
ATGTCCGATCAGTACGTCGCCGCGCAGGACCGCTACGAAGCCATGCCCTACCGCCGAACC
GGTCGGAGCGGTCTCAAACTCCCGGCGATCTCGCTCGGGCTCTGGCACAACTTCGGCGAC
GACGTACCGATCGAGAACCAGCGCGCAGTCCTGCGGCGGGCATTCGATCTCGGAATCACG
CACTTCGATCTGGCCAACAACTACGGGCCGCCGTACGGAAGCGCCGAGACGAACTTCGGC
AGGATCCTGCGTGAGGATTTCTCTTCGTACCGCGAGGAATTGGTCATCTCGTCGAAGGCC
GGGTGGGACATGTGGCCCGGTCCTTACGGGTTCGGCGGTTCCCGCAAGTACTTGCTGTCA
TCCCTCGACCAGTCGCTCGGCCGACTCGGAGTCGATTACGTCGACATCTTCTACAGCCAT
CGCCCCGACGCCGAGACTCCGATCGACGAGACCGCAGGCGCGCTGATCAGTGCCGTCCAG
CAGGGCAAGGCGCTGTACGCGGGTATCAGTTCGTATTCGCCGGAGCGCACCCGTGAAATC
GCCGCACTGCTCGCCGCTGCGGGGGTCCCCTTGTTGATCCACCAGCCGAGCTATTCGATG
CTGAATCGGTGGATCGAGCAGGACCTGCTTTCGGCTGTCGACGATCTCGGAGTGGGCGTC
ATCGCGTTCTCGCCGCTCGCGCAAGGCATGCTCACCGACCGGTATCTGAACGGCGTCCCC
GAGAATTCTCGCGCCGCCCAAGGTAAGTCACTCGATCCGTCGTGGTTGACCGACGACGCT
CTCACCCACATCCGCGCGCTCAACGACATCGCGGCAGACCGCGGCCAGTCGCTGGCTCAG
CTGGCACTGAGTTGGGCACTCCGCGATTCGCGGGTCACCTCGGTATTGATCGGTGCATCC
AGCGTCGCCCAACTCGAAGCCAACGTCGGCGCGCTCGACAATCTCGAATTCAGCACAGCC
GAACTGGCCTCCATAGATCAGCACGCAAAGGACAGCGGCATCAATCTGTGGGCAGAGGCC
AGTTCGATCTGA


>RER_45870 putative NADPH-dependent L-glyceraldehyde 3-phosphate reductase
MSDQYVAAQDRYEAMPYRRTGRSGLKLPAISLGLWHNFGDDVPIENQRAVLRRAFDLGIT
HFDLANNYGPPYGSAETNFGRILREDFSSYREELVISSKAGWDMWPGPYGFGGSRKYLLS
SLDQSLGRLGVDYVDIFYSHRPDAETPIDETAGALISAVQQGKALYAGISSYSPERTREI
AALLAAAGVPLLIHQPSYSMLNRWIEQDLLSAVDDLGVGVIAFSPLAQGMLTDRYLNGVP
ENSRAAQGKSLDPSWLTDDALTHIRALNDIAADRGQSLAQLALSWALRDSRVTSVLIGAS
SVAQLEANVGALDNLEFSTAELASIDQHAKDSGINLWAEASSI

NBRC No.	clone name	start	stop	length(bp)
G12-001-199	REGR1S8017G11	5,017,871	5,050,980	33,110

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.