CDS Information : RER_45880

Display	1000bp 10000bp 100000bp Clone

Rhodococcus erythropolis PR4 (= NBRC 100887) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Rhodococcus erythropolis PR4 (= NBRC 100887)
Replicon	chromosome
Start / Stop / Direction	5,028,139 / 5,027,027 / -
Location	complement(5027027..5028139)
Type	CDS
Length	1,113 bp (370 aa)

Product	probable polyphosphate kinase 2
Gene name	ppk2
Functional category	Metabolism - Energy Metabolism
EC number	2.7.4.1
Note
KEGG pathway	map:00190 ec:2.7.4.1
Sequence feature
References	Uniprot:Q8GCQ3 Pubmed:12486232

BLASTP Database:UniProtKB:14.0 show BLAST table	1 E=1e-138 B1MJH4_MYCAB Putative uncharacterized protein Alignment 2 E=1e-132 B2GJ25_KOCRD Polyphosphate kinase 2 Alignment 3 E=1e-128 B1TYE9_MICLU Putative uncharacterized protein Alignment 4 E=1e-122 Q0SG64_RHOSR Possible polyphosphate kinase Alignment 5 E=1e-116 B1W278_STRGG Putative uncharacterized protein Alignment
HAMAP	No significant hit
InterPro Database:interpro:18.0	IPR005660 Polyphosphate kinase 2 (Domain) PF03976   PPK2 IPR016898 Polyphosphate kinase 2, predicted (Family) PIRSF028756   Predicted polyphosphate kinase 2
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	370 amino acids
molecular mass	42,966.00 Da
pI	9.68
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 6.8 (25aa) 7 (26aa) 8.6 (32aa) 3 (11aa) 4.6 (17aa) 2.2 (8aa) 5.1 (19aa) 2.7 (10aa) 5.9 (22aa) 5.9 (22aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 5.7 (21aa) 0.8 (3aa) 1.6 (6aa) 3.2 (12aa) 3.5 (13aa) 6.2 (23aa) 2.7 (10aa) 10.3 (38aa) 6.5 (24aa) 7.6 (28aa)

>RER_45880 probable polyphosphate kinase 2
GTGAGGGTTCGGCGACTGGGAAGCCGGACCTGTCGTTACCTCCTCGATGCCAAGCAACAT
TCTCTTCGGACCCGCGGGAGCGGGCTTCGGCGCGTAAAATTCACTTTCCGGACGTTCGTT
CATTTCGACGACAGGGAGTGCGTATTCATGAGCCCCGACGCCAGCGGTGTGGACGGTCGG
GTTCCTGACCTGCCGACCCCGTCGACCAGAATTTCCGTCACCGAGGATTACGCGGCCGAG
ATCGACGAGCTGTCGAGTCTCAAGCACAAGCTCGGCGTGCTGGAGCCTTCGGAGTTCGCG
GATGCCTGGAAGCAGGGCTATCCGTACGAGAAGAAGATGTCGCGCCGCGAGTACGAGCGG
AAGAAGCGGCGTCTGCAGATCGAGTTGCTCAAGCTGCAGTTGTGGGTCAAGGAAACCGGT
CAGAAGGTGCTCATCATCTTCGAAGGTCGCGATGCTGCCGGTAAGGGCGGGTCGATCAAG
AGATTCACCGAGCATCTCAATCCCCGTGGAGCCCGCGTGGTCGCGCTCGAGAAGCCCACC
GACATCGAGCGGACGCAGTGGTATTTCCAACGCTATGTCGCACACCTACCCAGCGGCGGC
GAGATAGTGATGATGGACCGGTCCTGGTACAACCGCGCCGGCGTCGAACGAGTGATGGGT
TACTGCACGCCGACGCAGTATCTCGAGTTCATGAGAGAGACCCCGGACTTCGAGCGGATG
CTCGTCAACTCCGGGATTCATCTGCACAAGCTGTGGTTCTCGGTCAGCCGCGAAGAGCAG
TTGGCGCGATTCGCAGCCCGTCGAACAGACCCGGTGCGTCAGTGGAAGCTCTCACCGACT
GATCTGGCTTCGCTCGACAAGTGGGACGACTACACGCAGGCCAAGGAAGCGATGTTCTTC
TACACCGATACCGGGGATGCGCCCTGGACGGTGATCAAGAGCAACGACAAGAAGCGCGCC
CGCCTCGAAGCGATGCGTCACGTGCTCGCCAGCTTCGACTATCCCAACAAGGATCACCGG
GCAGTCGGTACTCCGGATCCCTTGATCGTCGGGCCTGCTTCGGCCGTATTCGAAGAGGGC
GAGCACGTGAACGTGGAGTTGCCTCAGCTCTAG


>RER_45880 probable polyphosphate kinase 2
MRVRRLGSRTCRYLLDAKQHSLRTRGSGLRRVKFTFRTFVHFDDRECVFMSPDASGVDGR
VPDLPTPSTRISVTEDYAAEIDELSSLKHKLGVLEPSEFADAWKQGYPYEKKMSRREYER
KKRRLQIELLKLQLWVKETGQKVLIIFEGRDAAGKGGSIKRFTEHLNPRGARVVALEKPT
DIERTQWYFQRYVAHLPSGGEIVMMDRSWYNRAGVERVMGYCTPTQYLEFMRETPDFERM
LVNSGIHLHKLWFSVSREEQLARFAARRTDPVRQWKLSPTDLASLDKWDDYTQAKEAMFF
YTDTGDAPWTVIKSNDKKRARLEAMRHVLASFDYPNKDHRAVGTPDPLIVGPASAVFEEG
EHVNVELPQL

NBRC No.	clone name	start	stop	length(bp)
G12-001-199	REGR1S8017G11	5,017,871	5,050,980	33,110

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.