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CDS Information : RER_55840

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close this sectionGenomic map

Display Clone

Rhodococcus erythropolis PR4 (= NBRC 100887) chromosome

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Overview 
Genome
Clone

close this sectionLocation

Organism Rhodococcus erythropolis PR4 (= NBRC 100887)
Replicon chromosome
Start / Stop / Direction 6,039,786 / 6,038,599 / -
Location complement(6038599..6039786)
Type CDS
Length 1,188 bp (395 aa)

close this sectionAnnotation

Product putative p-hydroxybenzoate hydroxylase
Synonym: 4-hydroxybenzoate 3-monooxygenase
Gene name pobA
Functional category Metabolism
- Biosynthesis of Secondary Metabolites and Biodegradation of Xenobiotics
EC number 1.14.13.2
Note
KEGG pathway map:00362 KO:K00481
map:00623 KO:K00481
Sequence feature
References Uniprot:P20586 Pubmed:8312276

close this sectionComputational search results

BLASTP
Database:UniProtKB:14.0
1E=0Q0SDP2_RHOSR4-hydroxybenzoate 3-monooxygenaseAlignment
2E=1e-162A4F7Y8_SACEN4-hydroxybenzoate hydroxylaseAlignment
3E=1e-142Q89GC5_BRAJA4-hydroxybenzoate hydroxylaseAlignment
4E=1e-132Q1LBX7_RALMEMonooxygenase, FAD-bindingAlignment
5E=1e-132Q13YB3_BURXL4-hydroxybenzoate 3-monooxygenase
PobB
Alignment
HAMAP No significant hit
InterPro
Database:interpro:18.0
IPR002938 Monooxygenase, FAD-binding (Domain)
 [5-347]  2.8e-89 PF01494
PF01494   FAD_binding_3
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 395 amino acids
molecular mass 44,075.65 Da
pI 5.81
aa composition
AlaValLeuIlePheTrpProMetGlySer
7.1
(28aa)
6.8
(27aa)
9.4
(37aa)
5.1
(20aa)
3.8
(15aa)
1.5
(6aa)
4.1
(16aa)
2.8
(11aa)
9.1
(36aa)
6.6
(26aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.8
(23aa)
1
(4aa)
1.8
(7aa)
3.3
(13aa)
2
(8aa)
2.5
(10aa)
4.3
(17aa)
8.4
(33aa)
8.4
(33aa)
6.3
(25aa)

open this sectionSequence

close this sectionCovered clones

NBRC No. clone name start stop length(bp)
G12-001-236 REGR1S8008H12 6,001,498 6,039,920 38,423
G12-001-237 REGR1S7003H03 6,030,241 6,075,059 44,819

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.