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CDS Information : RER_56700

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close this sectionGenomic map

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Rhodococcus erythropolis PR4 (= NBRC 100887) chromosome

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Overview 
Genome

close this sectionLocation

Organism Rhodococcus erythropolis PR4 (= NBRC 100887)
Replicon chromosome
Start / Stop / Direction 6,127,202 / 6,132,670 / +
Location 6127202..6132670
Type CDS
Length 5,469 bp (1,822 aa)

close this sectionAnnotation

Product putative glutamate synthase
Gene name
Functional category Metabolism
- Amino Acid Metabolism
EC number 1.4.-.-
Note
KEGG pathway map:00251
map:00910
Sequence feature
References Uniprot:Q51583 Pubmed:10318681
Uniprot:Q05755 Pubmed:10785395,12777402
Uniprot:P55037 Pubmed:7727752

close this sectionComputational search results

BLASTP
Database:UniProtKB:14.0
1E=0Q0SFS7_RHOSRProbable glutamate synthase large subunitAlignment
2E=0Q7D240_AGRT5Glutamate synthase large subunitAlignment
3E=0Q1GXP0_METFKGlutamate synthase
NADPH
Alignment
4E=0B1MBE6_MYCABGlutamate synthase, large subunitAlignment
5E=0B2VGU7_9ENTRGlutamate synthase
NADPH
Alignment
HAMAP No significant hit
InterPro
Database:interpro:18.0
IPR000583 Glutamine amidotransferase, class-II (Domain)
 [18-374]  8.7e-58 PF00310
PF00310   GATase_2
IPR002489 Glutamate synthase, alpha subunit, C-terminal (Domain)
 [1332-1631]  2.5e-58 G3DSA:2.160.20.60
G3DSA:2.160.20.60   no description
 [1404-1641]  3.2e-59 SSF69336
SSF69336   Alpha subunit of glutamate synthase, C-terminal domain
 [1398-1588]  1.6e-43 PF01493
PF01493   GXGXG
IPR002932 Glutamate synthase, central-C (Domain)
 [944-1297]  8.7e-113 PF01645
PF01645   Glu_synthase
IPR006982 Glutamate synthase, central-N (Domain)
 [455-729]  4.6e-35 PF04898
PF04898   Glu_syn_central
IPR013785 Aldolase-type TIM barrel (Domain)
 [435-778]  3.3e-76 G3DSA:3.20.20.70 [981-1329]  1.1e-99 G3DSA:3.20.20.70
G3DSA:3.20.20.70   no description
IPR017932 Glutamine amidotransferase, type II (Domain)
 [18-401]  17.546 PS51278
PS51278   GATASE_TYPE_2
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 1822 amino acids
molecular mass 195,490.52 Da
pI 5.79
aa composition
AlaValLeuIlePheTrpProMetGlySer
12.9
(235aa)
7.5
(136aa)
9.7
(176aa)
4.1
(74aa)
4.1
(74aa)
0.4
(7aa)
4.4
(81aa)
2.5
(45aa)
9.2
(167aa)
6.3
(114aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.4
(99aa)
0.9
(16aa)
2.9
(52aa)
2.9
(52aa)
2.4
(44aa)
3.1
(57aa)
2.6
(47aa)
6.8
(123aa)
6.3
(115aa)
5.9
(108aa)

open this sectionSequence