CDS Information : ROP_00130

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Rhodococcus opacus B4 chromosome	Legend Jump
Overview  Genome Proteome  Clone

Center position		change
ID		change
Gene name		change

Organism	Rhodococcus opacus B4
Replicon	chromosome
Start / Stop / Direction	12,669 / 11,665 / -
Location	complement(11665..12669)
Type	CDS
Length	1,005 bp (334 aa)

Product	alkylmercury lyase family protein
Gene name
Functional category	Unclassified - uncharacterized protein
EC number
Note
KEGG pathway
Sequence feature
References	Family/Domain:IPR004927

BLASTP Database:UniProtKB:14.0 show BLAST table	1 E=1e-105 Q5YM46_NOCFA Putative alkylmercury lyase Alignment 2 E=1e-66 A1SIR9_NOCSJ Alkylmercury lyase Alignment 3 E=2e-28 Q6XN26_RHOER Putative uncharacterized protein Alignment 4 E=2e-28 Q3L9N3_RHOE4 Putative uncharacterized protein Alignment 5 E=3e-17 Q9RHR0_BACME MerB3 Alignment
HAMAP	No significant hit
InterPro Database:interpro:18.0	IPR004927 Alkylmercury lyase (Family) PF03243   MerB IPR012336 Thioredoxin-like fold (Domain) SSF52833   Thioredoxin-like
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	334 amino acids
molecular mass	33,780.96 Da
pI	4.73
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 18 (60aa) 9 (30aa) 7.5 (25aa) 3.6 (12aa) 2.4 (8aa) 0.3 (1aa) 7.2 (24aa) 1.5 (5aa) 11.7 (39aa) 5.1 (17aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 6.6 (22aa) 2.1 (7aa) 0.6 (2aa) 1.8 (6aa) 1.2 (4aa) 0 (0aa) 3.3 (11aa) 6.6 (22aa) 6.3 (21aa) 5.4 (18aa)

>ROP_00130 alkylmercury lyase family protein
ATGAGGCTGGAAATCCTGCAGGTTCCCGGTTGCCCCCACGTGGCGTTGCTCGAGCAACGG
CTCGAGAATGTTCTGGCAGGACAGCAGTCCGAGGTGGAGATCTCGCATCGGGTGATCGAT
GACCCGGCGGTCGCCGCCGACGCCGGCATGACCGGCTCACCCACCCTGCTCGTCGACGGC
GCGGACCCTTTTGCCGCGCCCGGGCTGGTGCCGAGTGTGTCCTGCCGGCTCTATCCCGCC
GAGGGTGGCGGGGTCGGAGGCGCCCCGTCGGTGGCGGCGTTGCGGCAGGCGCTGCACGCG
GCGGCGGCCGACACGGCGGACGAGCCCGCCGACGGCCGGGGCGGCTGCTGCTCAGCGGGT
ACTGCGGCGGAATCGCCGCTGGCCGGATTGGGTGGATGGCGCGATGCGGCGCGGCCGCGG
ACTCCGGCCGAGCGGGCGATCCATTACGCGATTCTGCGGGCGTTCGCCGACCGCGGAGCG
CCACCCGAGCACGCCGAACTGGACTCGGTGGCAGCCGAATTCGGTGAGCCAGGTCGGCGG
GTCCTGGCCCGGTTGCACACTGCGGACGTGATCCGGCTCGATCCGGCCGGGCGGATCGCC
TCGGCCTATCCGTTCTCCACCTCGCCGACCCCGCACCGGGTGCGCATCGGGGGCGGGGCG
GGCGTGTACGCGATGTGCGCTGTGGATGCGCTGGGGATGTCCGCGATGCTCGCCGCCGAG
GTGGTGATCGAATCGGCCGACCCGGTCACCGGTGAGCACATCACCGTGACCGTGCACGGT
GAGAGCGCGGTGGCGACCCCGGCCACCGTGGTGGTGTTCGTCGGCGCAGACGCCGGGCAC
GGCCCCTCCGCGGACACGTGCTGCACCACCTTGAACTTCTTCACCGACCGCGGCACCGCC
CGGTCGGGGGCCGACGAGCACCCGCAGGTCGGCGGCATCGTCGTCGACCTCGCCGACGCC
ACCCGGCTCGGGGCGACAATCTTCGGCGGCGCGCTCACCACCTGA


>ROP_00130 alkylmercury lyase family protein
MRLEILQVPGCPHVALLEQRLENVLAGQQSEVEISHRVIDDPAVAADAGMTGSPTLLVDG
ADPFAAPGLVPSVSCRLYPAEGGGVGGAPSVAALRQALHAAAADTADEPADGRGGCCSAG
TAAESPLAGLGGWRDAARPRTPAERAIHYAILRAFADRGAPPEHAELDSVAAEFGEPGRR
VLARLHTADVIRLDPAGRIASAYPFSTSPTPHRVRIGGGAGVYAMCAVDALGMSAMLAAE
VVIESADPVTGEHITVTVHGESAVATPATVVVFVGADAGHGPSADTCCTTLNFFTDRGTA
RSGADEHPQVGGIVVDLADATRLGATIFGGALTT

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.