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CDS Information : ROP_00230

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close this sectionGenomic map

Display Clone

Rhodococcus opacus B4 chromosome

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Overview 
Genome
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Clone

close this sectionLocation

Organism Rhodococcus opacus B4
Replicon chromosome
Start / Stop / Direction 20,417 / 20,157 / -
Location complement(20157..20417)
Type CDS
Length 261 bp (86 aa)

close this sectionAnnotation

Product hypothetical protein
Gene name
Functional category Unclassified
- hypothetical protein (prediction only)
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComputational search results

BLASTP
Database:UniProtKB:14.0
No significant hit
HAMAP No significant hit
InterPro No significant hit
SignalP
 [1-23]  0.481 Signal
Bacteria, Gram-positive   
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 86 amino acids
molecular mass 9,028.14 Da
pI 8.26
aa composition
AlaValLeuIlePheTrpProMetGlySer
15.1
(13aa)
5.8
(5aa)
4.7
(4aa)
1.2
(1aa)
3.5
(3aa)
1.2
(1aa)
7
(6aa)
4.7
(4aa)
10.5
(9aa)
8.1
(7aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
8.1
(7aa)
2.3
(2aa)
3.5
(3aa)
1.2
(1aa)
2.3
(2aa)
2.3
(2aa)
5.8
(5aa)
5.8
(5aa)
3.5
(3aa)
3.5
(3aa)

open this sectionSequence

close this sectionCovered clones

NBRC No. clone name start stop length(bp)
G13-001-001 RO1FO01L80003B17 14,797 50,749 35,953

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.