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CDS Information : ROP_01140

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close this sectionGenomic map

Display Clone

Rhodococcus opacus B4 chromosome

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Clone

close this sectionLocation

Organism Rhodococcus opacus B4
Replicon chromosome
Start / Stop / Direction 98,567 / 100,549 / +
Location 98567..100549
Type CDS
Length 1,983 bp (660 aa)

close this sectionAnnotation

Product putative oxidoreductase
Gene name
Functional category Unclassified
- putative function (general)
EC number
Note
KEGG pathway
Sequence feature
References Uniprot:P32382 Pubmed:8357835
Uniprot:O87278 Pubmed:9758825

close this sectionComputational search results

BLASTP
Database:UniProtKB:14.0
1E=3e-94Q11C75_MESSBNADH:flavin oxidoreductase/NADH oxidaseAlignment
2E=2e-87A8HRE9_AZOC5FMN oxidoreductaseAlignment
3E=4e-86A9FX99_METNOFMN oxidoreductaseAlignment
4E=9e-86Q02DW4_PSEABPutative oxidoreductase, FMN-bindingAlignment
5E=3e-85A3L1M8_PSEAEPutative uncharacterized proteinAlignment
HAMAP No significant hit
InterPro
Database:interpro:18.0
IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal (Domain)
 [19-354]  9.7e-61 PF00724
PF00724   Oxidored_FMN
IPR001155 NADH:flavin oxidoreductase/NADH oxidase (Family)
 [19-354]  9.7e-61 PF00724
PF00724   Oxidored_FMN
IPR013027 FAD-dependent pyridine nucleotide-disulphide oxidoreductase (Domain)
 [400-474]  1.3e-09 PF07992
PF07992   Pyr_redox_2
IPR013785 Aldolase-type TIM barrel (Domain)
 [12-396]  9e-94 G3DSA:3.20.20.70
G3DSA:3.20.20.70   no description
IPR016040 NAD(P)-binding domain (Domain)
 [395-580]  1.4e-13 G3DSA:3.40.50.720
G3DSA:3.40.50.720   no description
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 660 amino acids
molecular mass 71,537.87 Da
pI 5.58
aa composition
AlaValLeuIlePheTrpProMetGlySer
10.2
(67aa)
8.2
(54aa)
7.9
(52aa)
6.5
(43aa)
2.9
(19aa)
1.2
(8aa)
6.5
(43aa)
1.8
(12aa)
9.4
(62aa)
7.1
(47aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
4.7
(31aa)
0.9
(6aa)
3.2
(21aa)
2.6
(17aa)
2.7
(18aa)
1.5
(10aa)
3.2
(21aa)
7.4
(49aa)
4.5
(30aa)
7.6
(50aa)

open this sectionSequence

close this sectionCovered clones

NBRC No. clone name start stop length(bp)
G13-001-003 RO1FO01L80009D04 62,334 100,826 38,493
G13-001-004 RO1FO01L80003O03 86,101 128,274 42,174

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.