CDS Information : ROP_22310

Display	1000bp 10000bp 100000bp Clone

Rhodococcus opacus B4 chromosome	Legend Jump
Overview  Genome Proteome  Clone

Center position		change
ID		change
Gene name		change

Organism	Rhodococcus opacus B4
Replicon	chromosome
Start / Stop / Direction	2,391,450 / 2,391,989 / +
Location	2391450..2391989
Type	CDS
Length	540 bp (179 aa)

Product	hypothetical protein
Gene name
Functional category	Unclassified - hypothetical protein
EC number
Note	Similar to the mini-circle hypothetical 19.1-kDa protein of Streptomyces coelicolor A3(2) (P14706).
KEGG pathway
Sequence feature
References

Proteome results	strainR (1DE-LC) Show sequence

BLASTP Database:UniProtKB:14.0 show BLAST table	1 E=4e-92 Q0SDS7_RHOSR Putative uncharacterized protein Alignment 2 E=6e-58 Q9K3X3_STRCO Putative uncharacterized protein SCO4371 Alignment 3 E=8e-53 A4FI57_SACEN Putative uncharacterized protein Alignment 4 E=4e-50 Q5YUR8_NOCFA Putative uncharacterized protein Alignment 5 E=5e-50 A8L0Q0_FRASN Putative uncharacterized protein Alignment
HAMAP	No significant hit
InterPro Database:interpro:18.0	IPR007061 Protein of unknown function DUF664 (Family) PF04978   DUF664
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	179 amino acids
molecular mass	19,632.07 Da
pI	6.63
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 10.6 (19aa) 7.3 (13aa) 9.5 (17aa) 4.5 (8aa) 2.2 (4aa) 1.7 (3aa) 3.4 (6aa) 1.1 (2aa) 8.4 (15aa) 5 (9aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 10.6 (19aa) 0.6 (1aa) 1.1 (2aa) 2.2 (4aa) 1.7 (3aa) 3.4 (6aa) 3.9 (7aa) 8.9 (16aa) 7.8 (14aa) 6.1 (11aa)

>ROP_22310 hypothetical protein
GTGATCACCGTAACCTCTACTGCGAAAACATCGACGACCGGCGAGCGTGCCGACTTGCTG
GAAACGCTGGCGAAACACCGCTACTTCCTCCGCTACACCGTGCGCAATCTCACCGACGAA
CAGGCCGCGCAGCGCACGACGGCGAGCGTGCTGTGCCTCGGCGGGCTCGTCAAGCACGTG
TCGGACACCGAGCGGGTGTGGGCCGACTTCATCGTGCGCGGCACCGATGCGGTGCGGGGC
GGTCCCGTGGACGGCACCGGCACCGGCAACCGCGAGAAGGAGTTCACCCTCCGCGACGAC
GAGACACTGGCCGGCGTCCTCGACCGCTACGCGCAGGTGGCGCACCGGACCGACGAGATC
GTCGCCGCGCTGCCCGACCTCGACATTTCGCATCCGCTGCCGAAGGCGCCGTGGTTCGAA
CCGGGATCGCGCTGGTCCGCGCGTCGCGTCCTGCTCCACATCATCGGTGAGACCGCTCAG
CACGCCGGGCACGCCGACATCATCCGCGAAGCCCTCGACGGGTCGAAGTCGATGGGCTGA


>ROP_22310 hypothetical protein
MITVTSTAKTSTTGERADLLETLAKHRYFLRYTVRNLTDEQAAQRTTASVLCLGGLVKHV
SDTERVWADFIVRGTDAVRGGPVDGTGTGNREKEFTLRDDETLAGVLDRYAQVAHRTDEI
VAALPDLDISHPLPKAPWFEPGSRWSARRVLLHIIGETAQHAGHADIIREALDGSKSMG

NBRC No.	clone name	start	stop	length(bp)
G13-001-091	RO1FO01L80005N14	2,357,410	2,402,351	44,942
G13-001-092	RO1FO01L80004L14	2,388,915	2,430,413	41,499

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.