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CDS Information : ROP_22370

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close this sectionGenomic map

Display Clone

Rhodococcus opacus B4 chromosome

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Overview 
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Proteome 
Clone

close this sectionLocation

Organism Rhodococcus opacus B4
Replicon chromosome
Start / Stop / Direction 2,395,386 / 2,396,597 / +
Location 2395386..2396597
Type CDS
Length 1,212 bp (403 aa)

close this sectionAnnotation

Product cytochrome P450
Gene name
Functional category Metabolism
- Biosynthesis of Secondary Metabolites and Biodegradation of Xenobiotics
EC number
Note
KEGG pathway map:00053 KO:K00517
map:00940 KO:K00517
map:00628 KO:K00517
map:00903 KO:K00517
map:00361 KO:K00517
Sequence feature
References Uniprot:P33271 Pubmed:1732208

close this sectionComputational search results

BLASTP
Database:UniProtKB:14.0
1E=0Q0SDS1_RHOSRCytochrome P450 CYP147Alignment
2E=1e-145Q70AS7_STRPEPutative cytochrome P450 reductaseAlignment
3E=1e-129Q1D4X1_MYXXDCytochrome P450 family proteinAlignment
4E=1e-121Q82QC6_STRAWPutative cytochrome P450Alignment
5E=1e-117Q46B58_METBFPutative cytochrome P450Alignment
HAMAP No significant hit
InterPro
Database:interpro:18.0
IPR001128 Cytochrome P450 (Family)
 [231-373]  5.2e-21 PF00067
PF00067   p450
 [6-400]  1.6e-109 G3DSA:1.10.630.10
G3DSA:1.10.630.10   no description
 [19-400]  2.6e-92 SSF48264
SSF48264   Cytochrome P450
 [185-374]  1.1e-30 PTHR19383
PTHR19383   CYTOCHROME P450
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 403 amino acids
molecular mass 44,678.66 Da
pI 4.81
aa composition
AlaValLeuIlePheTrpProMetGlySer
7.7
(31aa)
6.7
(27aa)
12.4
(50aa)
4
(16aa)
3.2
(13aa)
0.2
(1aa)
9.7
(39aa)
2.7
(11aa)
7.4
(30aa)
4
(16aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
4
(16aa)
0.7
(3aa)
4
(16aa)
3
(12aa)
1.5
(6aa)
1
(4aa)
3
(12aa)
9.4
(38aa)
8.7
(35aa)
6.7
(27aa)

open this sectionSequence

close this sectionCovered clones

NBRC No. clone name start stop length(bp)
G13-001-091 RO1FO01L80005N14 2,357,410 2,402,351 44,942
G13-001-092 RO1FO01L80004L14 2,388,915 2,430,413 41,499

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.