CDS Information : ROP_22620

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Rhodococcus opacus B4 chromosome	Legend Jump
Overview  Genome Proteome  Clone

Center position		change
ID		change
Gene name		change

Organism	Rhodococcus opacus B4
Replicon	chromosome
Start / Stop / Direction	2,417,904 / 2,417,314 / -
Location	complement(2417314..2417904)
Type	CDS
Length	591 bp (196 aa)

Product	hypothetical protein
Gene name
Functional category	Unclassified - hypothetical protein
EC number
Note
KEGG pathway
Sequence feature
References

BLASTP Database:UniProtKB:14.0 show BLAST table	1 E=1e-09 A0H3W7_9CHLR DNA polymerase, beta-like region Alignment 2 E=4e-09 Q0AXE8_SYNWW Putative uncharacterized protein Alignment 3 E=7e-09 Q8DGT1_SYNEL Tsl2232 protein Alignment 4 E=1e-08 A5UQ05_ROSS1 DNA polymerase, beta domain protein region Alignment 5 E=1e-08 Q2S4V1_SALRD Nucleotidyltransferase domain, putative Alignment
HAMAP	No significant hit
InterPro Database:interpro:18.0	IPR002934 DNA polymerase, beta-like region (Domain) PF01909   NTP_transf_2
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	196 amino acids
molecular mass	20,678.51 Da
pI	10.07
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 14.3 (28aa) 9.2 (18aa) 7.7 (15aa) 2 (4aa) 2.6 (5aa) 0.5 (1aa) 3.1 (6aa) 4.1 (8aa) 7.1 (14aa) 14.3 (28aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 4.1 (8aa) 2 (4aa) 2 (4aa) 1 (2aa) 1 (2aa) 3.6 (7aa) 2 (4aa) 9.7 (19aa) 6.6 (13aa) 3.1 (6aa)

>ROP_22620 hypothetical protein
ATGGCTGCACCTACGCCCCACAGCGAACGGCTGCGAGCGGTCCTGACCGCACATCGCGAC
GAAGTGCGACGGGTCTTCACGAAGTACGGTGCATTCGATGTCCAGTTGTTCGGGTCGGTC
GCCCGAGGCGACGCGGGGGCTGACAGTGATATCGATTTGTTGGTCAGTATCGATGCTCCG
GACTACGAGCAGGTTGTGTCGATGCTGGGCCTGGCCGACGAACTGTCCGAATTGCTGGGG
ACAAAGGTGGACGTCGTTGCACCTTCTTTAATAAGTACTCACGGGCGCCGAAGGCGCAAA
AACGGCGCGAAGAGCCGGGCCGTGTTCGCCGACGCGGTCGCGGTGTCTTCCGGTGGGTTG
GCGATGAAACTCAACGCAAGCCGGACGATGGCGTGCGCGAGGATGTCCGCGTCTTCGGGG
GAGGCGTTCACCCACGACCGCTGCAATGTCTCGGCGAGCCGTTCGGCCGCGGGGCGGATG
ATGATGTCGCTGTCCGTGGTGATCAAGCGCAGCAGGTCCTCGGGCGCCTGCCCCTGGTGC
AGCGACAGCACCAGGGGATCGGCGCCGCTGAGTTCGAAGAACGTCGCATAG


>ROP_22620 hypothetical protein
MAAPTPHSERLRAVLTAHRDEVRRVFTKYGAFDVQLFGSVARGDAGADSDIDLLVSIDAP
DYEQVVSMLGLADELSELLGTKVDVVAPSLISTHGRRRRKNGAKSRAVFADAVAVSSGGL
AMKLNASRTMACARMSASSGEAFTHDRCNVSASRSAAGRMMMSLSVVIKRSRSSGACPWC
SDSTRGSAPLSSKNVA

NBRC No.	clone name	start	stop	length(bp)
G13-001-092	RO1FO01L80004L14	2,388,915	2,430,413	41,499

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.