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CDS Information : ROP_22630

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close this sectionGenomic map

Display Clone

Rhodococcus opacus B4 chromosome

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close this sectionLocation

Organism Rhodococcus opacus B4
Replicon chromosome
Start / Stop / Direction 2,419,333 / 2,418,155 / -
Location complement(2418155..2419333)
Type CDS
Length 1,179 bp (392 aa)

close this sectionAnnotation

Product p-hydroxybenzoate hydroxylase
Synonym: 4-hydroxybenzoate 3-monooxygenase
Gene name pobA
Functional category Metabolism
- Biosynthesis of Secondary Metabolites and Biodegradation of Xenobiotics
EC number 1.14.13.2
Note
KEGG pathway
Sequence feature
References Uniprot:P20586 Pubmed:8312276

close this sectionComputational search results

BLASTP
Database:UniProtKB:14.0
1E=0Q0SDP2_RHOSR4-hydroxybenzoate 3-monooxygenaseAlignment
2E=1e-163A4F7Y8_SACEN4-hydroxybenzoate hydroxylaseAlignment
3E=1e-144Q89GC5_BRAJA4-hydroxybenzoate hydroxylaseAlignment
4E=1e-129Q1LBX7_RALMEMonooxygenase, FAD-bindingAlignment
5E=1e-129B2T4W8_BURPP4-hydroxybenzoate 3-monooxygenaseby acc
HAMAP No significant hit
InterPro
Database:interpro:18.0
IPR002938 Monooxygenase, FAD-binding (Domain)
 [2-344]  1.8e-94 PF01494
PF01494   FAD_binding_3
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 392 amino acids
molecular mass 43,417.87 Da
pI 5.83
aa composition
AlaValLeuIlePheTrpProMetGlySer
6.6
(26aa)
7.7
(30aa)
9.2
(36aa)
4.8
(19aa)
4.1
(16aa)
1.5
(6aa)
4.3
(17aa)
2.3
(9aa)
10.2
(40aa)
5.6
(22aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
7.4
(29aa)
0.8
(3aa)
2.3
(9aa)
3.1
(12aa)
2
(8aa)
2.3
(9aa)
4.1
(16aa)
7.9
(31aa)
7.7
(30aa)
6.1
(24aa)

open this sectionSequence

close this sectionCovered clones

NBRC No. clone name start stop length(bp)
G13-001-092 RO1FO01L80004L14 2,388,915 2,430,413 41,499
G13-001-093 RO1FO01L80010A12 2,418,033 2,454,632 36,600

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.