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CDS Information : ROP_22680

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close this sectionGenomic map

Display Clone

Rhodococcus opacus B4 chromosome

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Overview 
Genome
Proteome 
Clone

close this sectionLocation

Organism Rhodococcus opacus B4
Replicon chromosome
Start / Stop / Direction 2,424,373 / 2,424,765 / +
Location 2424373..2424765
Type CDS
Length 393 bp (130 aa)

close this sectionAnnotation

Product hypothetical protein
Gene name
Functional category Unclassified
- hypothetical protein
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionProteome

Proteome results
strainR (1DE-LC)
strainO+OA (1DE-LC)
Show sequence

close this sectionComputational search results

BLASTP
Database:UniProtKB:14.0
1E=5e-64Q0SDN7_RHOSRPutative uncharacterized proteinAlignment
2E=5e-31Q9F3P5_STRCOPutative uncharacterized protein SCO7642Alignment
3E=4e-25A3TLS9_9MICOPutative uncharacterized proteinAlignment
4E=8e-21A6W9Y2_KINRDGlyoxalase/bleomycin resistance protein/dioxygenaseAlignment
5E=6e-18B2BM62_9ACTOPutative uncharacterized proteinAlignment
HAMAP No significant hit
InterPro
Database:interpro:18.0
IPR004360 Glyoxalase/bleomycin resistance protein/dioxygenase (Domain)
 [11-126]  2.1e-12 PF00903
PF00903   Glyoxalase
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 130 amino acids
molecular mass 13,857.49 Da
pI 4.26
aa composition
AlaValLeuIlePheTrpProMetGlySer
10.8
(14aa)
13.1
(17aa)
5.4
(7aa)
3.1
(4aa)
3.8
(5aa)
0.8
(1aa)
6.9
(9aa)
3.1
(4aa)
10
(13aa)
3.8
(5aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
7.7
(10aa)
0
(0aa)
2.3
(3aa)
1.5
(2aa)
2.3
(3aa)
1.5
(2aa)
2.3
(3aa)
6.2
(8aa)
10
(13aa)
5.4
(7aa)

open this sectionSequence

close this sectionCovered clones

NBRC No. clone name start stop length(bp)
G13-001-092 RO1FO01L80004L14 2,388,915 2,430,413 41,499
G13-001-093 RO1FO01L80010A12 2,418,033 2,454,632 36,600

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.