CDS Information : SA0017

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Staphylococcus aureus N315 chromosome

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Overview
Genome

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ID		change
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Genome	Display	Sync
chromosome

Location

Organism	Staphylococcus aureus N315
Replicon	chromosome
Start / Stop / Direction	24,928 / 25,635 / +
Location	24928..25635
Type	CDS
Length	708 bp (235 aa)

Annotation

Product	response regulator
Gene name	vicR
Functional category	Information pathways - RNA synthesis
EC number
Note
KEGG pathway
Sequence feature
References

Comparative genome

Table

Display	BBH1e-1001e-501e-101e-3

Staphylococcus epidermidis ATCC 12228	Staphylococcus epidermidis RP62A
[18] SE0018 6e-133(465) response regulator [1369] SE1369 4e-62(230) alkaline phosphatase synthesis transcriptional regulatory protein [1176] SE1176 2e-45(174) respiratory response protein SrrA [1100] SE1100 1e-38(152) putative response regulator ArlR [1941] SE1941 3e-38(150) two component response regulator [479] SE0479 8e-37(146) response regulator [120] SE0120 8e-30(123) response regulator [2195] SE2195 3e-28(117) two-component response regulator [427] SE0427 4e-27(114) two-component response regulator [165] SE0165 7e-07(46.6) two-component response regulator [1529] SE1529 3e-06(44.7) two-component response regulator-like protein [1969] SE1969 1e-05(42.7) response regulators of two-component regulatory [1002] SE1002 0.0001(39.7) two-component response regulator [2012] SE2012 0.0003(37.7) two-component response regulator	[2473] SERP2534 6e-133(465) DNA-binding response regulator YycF(yycF) [1227] SERP1256 4e-62(230) alkaline phosphatase synthesis transcriptional regulatory protein PhoP(phoP) [1030] SERP1055 2e-45(174) DNA-binding response regulator SrrA(srrA) [965] SERP0989 6e-39(153) DNA-binding response regulator ArlR(arlR) [1909] SERP1953 1e-38(152) DNA-binding response regulator [360] SERP0365 8e-37(146) DNA-binding response regulator SaeR(saeR) [2431] SERP2490 5e-29(120) DNA-binding response regulator KdeP(kdeP) [2160] SERP2206 3e-28(117) DNA-binding response regulator [307] SERP0312 4e-27(114) DNA-binding response regulator [2351] SERP2406 2e-07(48.5) AraC family DNA-binding response regulator [1351] SERP1384 3e-06(44.7) LuxR family DNA-binding response regulator [1935] SERP1981 4e-05(40.8) transcriptional regulatory protein DegU, putative [1979] SERP2025 0.0003(37.7) two-component response regulator(lytR) [867] SERP0889 0.0005(37.4) LuxR family DNA-binding response regulator

Staphylococcus epidermidis ATCC 12228

Staphylococcus epidermidis RP62A

[18] SE0018 6e-133(465)
response regulator

[2473] SERP2534 6e-133(465)
DNA-binding response regulator YycF(yycF)

UniProt	Q7A8E1
INSD	BAB41234.1 (DDBJ GenBank EMBL)
RefSeq	NP_373256.1
GI	15925723
GeneID	1122791
UniParc	UPI000005499D

Computational search results

BLASTP
Database:UniProtKB:2010_04

show BLAST table

1	E=1e-134	D1GU30_STAA0	Transcriptional regulatory protein WalR	Alignment
2	E=1e-134	D3ER59_STAAU	Two-component response regulator	Alignment
3	E=1e-134	D2UVU8_STAAU	DNA-binding response regulator YycF	Alignment
4	E=1e-134	D2UIJ6_STAAU	Two-component system OmpR family response regulator VicR	Alignment
5	E=1e-134	D2N360_STAAU	Alkaline phosphatase synthesis transcriptional regulatory proteinphoP	Alignment

HAMAP

No significant hit

InterPro
Database:interpro:25.0

IPR001789 Response regulator receiver (Domain)
	PF00072 Response_reg
	PS50110 RESPONSE_REGULATORY
	SM00448 no description
IPR001867 Transcriptional regulatory protein, C-terminal (Domain)
	SM00862 no description
	PF00486 Trans_reg_C
IPR011006 CheY-like (Domain)
	SSF52172 CheY-like

SignalP

No significant hit

TMHMM

No significant hit

SOSUI

No significant hit

Calculated information (Amino acid sequence)

size of protein

235 amino acids

molecular mass

27,451.30 Da

4.81

aa composition

Ala	Val	Leu	Ile	Phe	Trp	Pro	Met	Gly	Ser
4.3 (10aa)	8.9 (21aa)	8.1 (19aa)	7.7 (18aa)	2.6 (6aa)	0.4 (1aa)	3.8 (9aa)	3.4 (8aa)	5.5 (13aa)	2.6 (6aa)
Thr	Cys	Asn	Gln	Tyr	Lys	His	Arg	Asp	Glu
5.1 (12aa)	0.9 (2aa)	2.1 (5aa)	3 (7aa)	6 (14aa)	6.4 (15aa)	3 (7aa)	7.2 (17aa)	9.8 (23aa)	9.4 (22aa)

Sequence

>SA0017 response regulator
ATGCAAATGGCTAGAAAAGTTGTTGTAGTTGATGATGAAAAACCGATTGCTGATATTTTA
GAATTTAACTTAAAAAAAGAAGGATACGATGTGTACTGTGCATACGATGGTAATGATGCA
GTCGACTTAATTTATGAAGAAGAACCAGACATCGTATTACTAGATATCATGTTACCTGGT
CGTGATGGTATGGAAGTATGTCGTGAAGTGCGCAAAAAATACGAAATGCCAATAATAATG
CTTACTGCTAAAGATTCAGAAATTGATAAAGTGCTTGGTTTAGAACTAGGTGCAGATGAC
TATGTAACGAAACCGTTTAGTACGCGTGAATTAATCGCACGTGTGAAAGCGAACTTACGT
CGTCATTACTCACAACCAGCACAAGACACTGGAAATGTAACGAATGAAATCACAATTAAA
GATATTGTGATTTATCCAGACGCATATTCTATTAAAAAACGTGGCGAAGATATTGAATTA
ACACATCGTGAATTTGAATTGTTCCATTATTTATCAAAACATATGGGACAAGTAATGACA
CGTGAACATTTATTACAAACAGTATGGGGCTATGATTACTTTGGCGATGTACGTACGGTC
GATGTAACGATTCGTCGTTTACGTGAAAAGATTGAAGATGATCCGTCACATCCTGAATAT
ATTGTGACGCGTAGAGGCGTTGGATATTTCCTCCAACAACATGAGTAG


>SA0017 response regulator
MQMARKVVVVDDEKPIADILEFNLKKEGYDVYCAYDGNDAVDLIYEEEPDIVLLDIMLPG
RDGMEVCREVRKKYEMPIIMLTAKDSEIDKVLGLELGADDYVTKPFSTRELIARVKANLR
RHYSQPAQDTGNVTNEITIKDIVIYPDAYSIKKRGEDIELTHREFELFHYLSKHMGQVMT
REHLLQTVWGYDYFGDVRTVDVTIRRLREKIEDDPSHPEYIVTRRGVGYFLQQHE

CDS Information : SA0017

Genomic map

Staphylococcus aureus N315 chromosome

Location

Annotation

Comparative genome

Related links to external database

Computational search results

Calculated information (Amino acid sequence)

Sequence