CDS Information : SA0026

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Staphylococcus aureus N315 chromosome

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Overview
Genome

Center position		change
ID		change
Gene name		change

Genome	Display	Sync
chromosome

Location

Organism	Staphylococcus aureus N315
Replicon	chromosome
Start / Stop / Direction	37,109 / 36,435 / -
Location	complement(36435..37109)
Type	CDS
Length	675 bp (224 aa)

Annotation

Product	transposase for IS-like element
Gene name
Functional category	Other functions - Transposon and IS
EC number
Note
KEGG pathway
Sequence feature
References

Comparative genome

Table

Display	BBH1e-1001e-501e-101e-3

Staphylococcus epidermidis ATCC 12228	Staphylococcus epidermidis RP62A
[90] SE0090 2e-124(437) transposase for IS-like element [79] SE0079 2e-124(436) transposase for IS-like element [71] SE0071 1e-123(434) transposase for IS-like element	[2465] SERP2526 2e-125(440) IS431mec-like transposase [2500] SEA0008 2e-124(437) IS431mec-like transposase [2512] SEA0020 4e-124(436) IS431mec-like transposase [1542] SERP1579 2e-123(434) IS431mec-like transposase [244] SERP0249 1e-122(431) IS431mec-like transposase [2494] SEA0002 3e-112(396) truncated IS431mec-like transposase [2513] SEA0021 1e-110(391) truncated IS431mec-like transposase [1551] SERP1588 6e-73(266) IS431mec-like transposase [1546] SERP1583 7e-48(182) IS431mec-like transposase

Staphylococcus epidermidis ATCC 12228

Staphylococcus epidermidis RP62A

[90] SE0090 2e-124(437)
transposase for IS-like element

[2465] SERP2526 2e-125(440)
IS431mec-like transposase

UniProt	P0A044
INSD	BAB41243.1 (DDBJ GenBank EMBL)
RefSeq	NP_373265.1
GI	15925732
GeneID	1122800
UniParc	UPI0000000720

Computational search results

BLASTP
Database:UniProtKB:2010_04

show BLAST table

1	E=1e-129	Q6GKR8_STAAR	Putative transposase	Alignment
2	E=1e-129	Q5HK26_STAEQ	IS431mec-like transposase	Alignment
3	E=1e-129	Q5HJW8_STAAC	IS431mec, transposase	Alignment
4	E=1e-129	Q4LAC9_STAHJ	Transposase for IS431	Alignment
5	E=1e-129	Q2FKN0_STAA3	Putative transposase	Alignment

HAMAP

No significant hit

InterPro
Database:interpro:25.0

IPR001584 Integrase, catalytic region (Domain)
	PF00665 rve
	PS50994 INTEGRASE
IPR012337 Polynucleotidyl transferase, Ribonuclease H fold (Domain)
	SSF53098 Ribonuclease H-like

SignalP

No significant hit

TMHMM

No significant hit

SOSUI

No significant hit

Calculated information (Amino acid sequence)

size of protein

224 amino acids

molecular mass

26,915.40 Da

10.43

aa composition

Ala	Val	Leu	Ile	Phe	Trp	Pro	Met	Gly	Ser
6.3 (14aa)	4.9 (11aa)	6.7 (15aa)	9.8 (22aa)	2.7 (6aa)	2.2 (5aa)	2.2 (5aa)	1.3 (3aa)	3.1 (7aa)	5.4 (12aa)
Thr	Cys	Asn	Gln	Tyr	Lys	His	Arg	Asp	Glu
4.9 (11aa)	1.8 (4aa)	4 (9aa)	4.5 (10aa)	8.9 (20aa)	12.5 (28aa)	4 (9aa)	7.1 (16aa)	4 (9aa)	3.6 (8aa)

Sequence

>SA0026 transposase for IS-like element
ATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTAC
TATCTAAGATATACATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTA
AACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTGTATCAA
ATTTGGAAGAAAAAGCATAAAAAAGCTTATTACAAATGGCGTATTGATGAGACGTACATC
AAAATAAAAGGAAAATGGAGCTATTTATATCGTGCCATTGATGCAGAGGGACATACATTA
GATATTTGGTTGCGTAAGCAACGAGATAATCATTCAGCATATGCGTTTATCAAACGTCTC
ATTAAACAATTTGGTAAACCTCAAAAGGTAATTACAGATCAGGCACCTTCAACGAAGGTA
GCAATGGCTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGTCATTGTACATCGAAA
TATCTGAATAACCTCATTGAGCAAGATCACCGTCATATTAAAGTAAGAAAGACAAGGTAT
CAAAGTATCAATACAGCAAAGAATACTTTAAAAGGTATTGAATGTATTTACGCTCTATAT
AAAAAGAACCGCAGGTCTCTTCAGATCTACGGATTTTCGCCATGCCACGAAATTAGCATC
ATGCTAGCAAGTTAA


>SA0026 transposase for IS-like element
MNYFRYKQFNKDVITVAVGYYLRYTLSYRDISEILRERGVNVHHSTVYRWVQEYAPILYQ
IWKKKHKKAYYKWRIDETYIKIKGKWSYLYRAIDAEGHTLDIWLRKQRDNHSAYAFIKRL
IKQFGKPQKVITDQAPSTKVAMAKVIKAFKLKPDCHCTSKYLNNLIEQDHRHIKVRKTRY
QSINTAKNTLKGIECIYALYKKNRRSLQIYGFSPCHEISIMLAS

CDS Information : SA0026

Genomic map

Staphylococcus aureus N315 chromosome

Location

Annotation

Comparative genome

Related links to external database

Computational search results

Calculated information (Amino acid sequence)

Sequence