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CDS Information : SA0035

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Staphylococcus aureus N315 chromosome

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Overview 
Genome

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Organism Staphylococcus aureus N315
Replicon chromosome
Start / Stop / Direction 42,539 / 42,880 / +
Location 42539..42880
Type CDS
Length 342 bp (113 aa)

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Product probable HMG-CoA synthase
Gene name
Functional category Intermediary metabolism
- Metabolism of carbohydrates and related molecules
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Staphylococcus epidermidis ATCC 12228Staphylococcus epidermidis RP62A
[2464] SERP2525 3e-27(112)
HMG-CoA synthase, truncation

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UniProtQ7A8C9
INSDBAB41253.1 (DDBJ GenBank EMBL)
RefSeqNP_373275.1
GI15925742
GeneID1122809
UniParcUPI00000CAAB0

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=2e-59Q99XE4_STAAMProbable HMG-CoA synthaseAlignment
2E=2e-59Q7A8C9_STAANProbable HMG-CoA synthaseAlignment
3E=2e-59A7WWU1_STAA1Probable HMG-CoA synthaseAlignment
4E=2e-59D1QDE5_STAAUHMG-CoA synthaseAlignment
5E=5e-59Q3YK37_STAAUPutative HMG-CoA synthaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal (Domain)
 [1-108]  5.9e-11 PF08540
PF08540   HMG_CoA_synt_C
IPR016039 Thiolase-like (Domain)
 [1-113]  1.5e-28 SSF53901
SSF53901   Thiolase-like
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 113 amino acids
molecular mass 13,360.94 Da
pI 4.53
aa composition
AlaValLeuIlePheTrpProMetGlySer
1.8
(2aa)		4.4
(5aa)		10.6
(12aa)		5.3
(6aa)		7.1
(8aa)		0
(0aa)		1.8
(2aa)		1.8
(2aa)		5.3
(6aa)		9.7
(11aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
4.4
(5aa)		0.9
(1aa)		3.5
(4aa)		4.4
(5aa)		8
(9aa)		7.1
(8aa)		2.7
(3aa)		3.5
(4aa)		5.3
(6aa)		12.4
(14aa)

open this sectionSequence