DOGAN: CDS Information : SA0067

Display

Staphylococcus aureus N315 chromosome

Overview
Genome

Center position		change
ID		change
Gene name		change

Genome	Display	Sync
chromosome

Organism	Staphylococcus aureus N315
Replicon	chromosome
Start / Stop / Direction	76,812 / 74,179 / -
Location	complement(74179..76812)
Type	CDS
Length	2,634 bp (877 aa)

Product	hypothetical protein, similar to kdp operon sensor protein
Gene name	kdpD(SCCmec)
Functional category	Cell envelope and cellular processes - Sensors (signal transduction)
EC number
Note
KEGG pathway
Sequence feature
References

Table

Display	BBH1e-1001e-501e-101e-3

Staphylococcus epidermidis ATCC 12228	Staphylococcus epidermidis RP62A
[19] SE0019 2e-11(64.3) two-component sensor histidine kinase [1368] SE1368 3e-11(63.2) alkaline phosphatase synthesis sensor protein [1175] SE1175 6e-10(58.9) respiratory response protein SrrB [1099] SE1099 1e-06(48.5) putative protein histidine kinase ArlS	[2430] SERP2489 0(1695) sensor histidine kinase KdpD (EC:2.7.3.-)(kdpD) [2472] SERP2533 2e-11(64.3) sensory box histidine kinase YycG(yycG) [1226] SERP1255 7e-11(62.4) sensory box histidine kinase PhoR(phoR) [1029] SERP1054 7e-10(58.9) sensor histidine kinase SrrB(srrB) [964] SERP0988 8e-07(48.9) sensor histidine kinase ArlS(arlS)

UniProt	Q7A8A7
INSD	BAB41285.1 (DDBJ GenBank EMBL)
RefSeq	NP_373307.1
GI	15925774
GeneID	1122841
UniParc	UPI00000CAD5D

BLASTP
Database:UniProtKB:2010_04

show BLAST table

1	E=0	Q99QS9_STAAM	Sensor protein	Alignment
2	E=0	Q7A8A7_STAAN	Sensor protein	Alignment
3	E=0	A7WWZ6_STAA1	Sensor protein	Alignment
4	E=0	D3ERB0_STAAU	Osmosensitive K+ channel histidine kinase KdpD	Alignment
5	E=0	Q6GKN5_STAAR	Sensor protein	Alignment

HAMAP

No significant hit

InterPro
Database:interpro:25.0

IPR003594 ATP-binding region, ATPase-like (Domain)
	SM00387 no description
	G3DSA:3.30.565.10 no description
	PF02518 HATPase_c
	SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
IPR003661 Histidine kinase A, N-terminal (Domain)
	PF00512 HisKA
	SM00388 no description
IPR003852 Osmosensitive K+ channel His kinase sensor, N-terminal (Domain)
	PF02702 KdpD
IPR005467 Histidine kinase (Domain)
	PS50109 HIS_KIN
IPR009082 Histidine kinase, homodimeric (Domain)
	SSF47384 Homodimeric domain of signal transducing histidine kinase

SignalP

No significant hit

TMHMM

Transmembrane 4

SOSUI

Transmembrane 3

size of protein

877 amino acids

molecular mass

100,610.87 Da

pI

6.18

aa composition

Ala	Val	Leu	Ile	Phe	Trp	Pro	Met	Gly	Ser
5.2 (46aa)	5 (44aa)	10.3 (90aa)	10.3 (90aa)	4.4 (39aa)	0.7 (6aa)	3 (26aa)	1.9 (17aa)	4 (35aa)	7.6 (67aa)
Thr	Cys	Asn	Gln	Tyr	Lys	His	Arg	Asp	Glu
6.4 (56aa)	0.5 (4aa)	5.2 (46aa)	5.4 (47aa)	4.1 (36aa)	6 (53aa)	3.8 (33aa)	3.8 (33aa)	5 (44aa)	7.4 (65aa)

>SA0067 hypothetical protein, similar to kdp operon sensor protein
ATTTATTTAGGCTATAGCCCAGGGGTAGGTAAAACGTATGAAATGTTATCAAATGGTATT
GATCAGTATCAAGAAGGTGCAGATATTAAAATTGGTTATATCGAACCCCATCAACGCCCT
GAAACCAATGCACTGGTTCAACAATTGCCTGAAATTTCGACCTCCAGCCGTAAATTTGGC
AGCCACACCTTTCACTATATAGATGTCTCTAAAATCATAGAAGCTAATCCAGATGTGGTC
TTAATTGATGAACTAGCACATACAAACATTTCAAAAGAGCGCCATTTAAAACGTTATAAG
GATATAGAAGAAATTCTATCGCATGGTATCGATGTCTGGACAACACTCAACATCCAACAT
ATCGAGAGTCTAAGCGGACAAATTGCGTTAATGACAGGTATTCAAGTTACAGAACGTGTG
CCCGACCAATTCATTACGTCAGCAGATGCCTTTGAAGTTGTGGATATTTCACCAAATATG
TTGATTCAGCGCCTTAAAGCAGGAAAAGTATATAAAAAAGAACGCTTAGAAACAGCCTTT
TCTAATTTCTTTACGTATGAAAATCTGACAGAGCTGCGTGAACTTACACTCAGAACTGTC
GCAGATATTATGAGTCAAAAAGGACAACAATATAAAACTAAACATACCGACATTACACCG
CATATTGCGGTAGCTATCAGCGGCAGTATTTATAACGAACGGGTCATACGAGAAGCAAGA
CGTGCTGCCTATAAAGAACATGCTAAATTCACAGCTGTGTATATTGATGTCTTTGAGACA
CCGTCAGAAAGCAGAAAACAAGATCATTATGTCCATAAAAATCTAATGCTCGCCAAAGCG
TTAGGTGCAGAAATCAAAGTGTTGTATGCACAAGATATTGCGAAAGCGTTAACCGATTGG
TGTGATCTCGCTTTTGTGACGAAGCTAGTCCTTGGACAGTCAGAACAGCCACGTTGGAAA
GATTACTTTAAACAGTCACTCATTGAACAAATTAATCACGTACCACACCATTTCAAGTTA
GAAATTGTACCGATTCATTATATTCATTCAGACAAACCTACAAATACACCTAAGCAAGCT
CAAAAATCCTCTCGTTTAACTGTAGAGATTATGAAGATGCTTGTAATTCAAACGATCTGT
GTCTTGCTCGGTATATGGGTTTACAACTTAGATAAAAGCGAATCCAGTGCCATTATCTTG
CTGATGTTCTTTATCGGTATTATCGTGCTTTCTATTTGGACCCAATCCTATTTAATCGGA
TTCTTTGCGTCTATCTTAAATGTGTTTGTTTTTAATTATTTCTTTACGGTGCCAAGATTC
ACTTTAGAAATGTATCGCTTTGAATATCCGATTACGTTTGCGACCAGTATTTTTGCTAGT
ATCTTTACGAGTGCCATCTTAAAGAATTTAAAACATCAGCATTCCTTAACAGAACGGCAG
TTATATCGGACCAATATTATGCTGCAATTTAACCAGTCCATTAAAGAATCTTATTCAATT
GAACGCTTATTAAATATTGCTGGTGATCAGATTCATCAGCTACTCAATCAGGATGTCACG
GTATTCTTAATTCAAAGTAAGAAAGTCGCTGCTTCCAACTCATTTGGAAACAGAAGCATT
TCAAGCTCAGATAAGACACATGATGCTGAGACATTGAGCTGGGTCATTGAAAATGAAAGC
CGTGCCGGTAAATTAACCGATACCTTTCCTGGCAGTAAATTTTTGTGTATTCCCATTGGC
ACAAATCCAGTCAAAGGTGTGATTTCTATCCGCTTCACCGACGAAACTTACATCGACACC
TATGACAATTCAATATTAGACTCTATGTTGAACGATATTACCCTGGCAATAGAGAATGTG
GATCTATTAAAACAAACCAGACAATCCATATTGAAAGCTGAACGAGAAGCCACACGTTCA
AACTTCTTGCATTCAATTTCACATGATATTAGAACACCACTGACTTCCATTATGGGCAAC
TTAGATATGCTGAAATACCATAACGAGCATTTAAACGATCAACAACAAGCAGAACTCTTA
ACTGCTTCTTATGGCGAAGCACAATATCTGCATACCTTAGTCACAAATATTTTATCTTTG
ACTAAGTTAGAAAGCTCTGACATTCAAATACAACGCACCCCTTATTTAGTAGAAGAACTT
CTAGAAGAATTTGAAGAAGGCCTCATACGCAGACACCAAGCAAATCATGTCATTATTGAA
AATGAGGATGACGCTTCACTCATTAATATCGACAGTAAATTAATACTGCAAGTGCTATTC
AACCTTATCGATAATGCTTTAAAGCATGCAGAATCACATTCTGAAATAAAACTGCACGTT
CAACATGAAACAAACAAAATAAAATTCGAAATGATAGATTGCGGAAAAGGTATTCCAGAA
GAAGAACGTCAATTGATTTTTAATCCCTATTATTCAGGAGACAACTTTAAAGACAATAAA
AAAGATAGTTTGGGATTAGGGCTCTATTTAGTACAACTCATCTTGAAACAACACAACAGT
GAATTAGAATATCAACCGAATACACCACAAGGCAGTATTTTTTATTTTTATTTGACTGTT
AATCCAATTGAAATGGAGGGAGCCATGGATGAAAACAACATTATTGGTCGTTGA


>SA0067 hypothetical protein, similar to kdp operon sensor protein
MYLGYSPGVGKTYEMLSNGIDQYQEGADIKIGYIEPHQRPETNALVQQLPEISTSSRKFG
SHTFHYIDVSKIIEANPDVVLIDELAHTNISKERHLKRYKDIEEILSHGIDVWTTLNIQH
IESLSGQIALMTGIQVTERVPDQFITSADAFEVVDISPNMLIQRLKAGKVYKKERLETAF
SNFFTYENLTELRELTLRTVADIMSQKGQQYKTKHTDITPHIAVAISGSIYNERVIREAR
RAAYKEHAKFTAVYIDVFETPSESRKQDHYVHKNLMLAKALGAEIKVLYAQDIAKALTDW
CDLAFVTKLVLGQSEQPRWKDYFKQSLIEQINHVPHHFKLEIVPIHYIHSDKPTNTPKQA
QKSSRLTVEIMKMLVIQTICVLLGIWVYNLDKSESSAIILLMFFIGIIVLSIWTQSYLIG
FFASILNVFVFNYFFTVPRFTLEMYRFEYPITFATSIFASIFTSAILKNLKHQHSLTERQ
LYRTNIMLQFNQSIKESYSIERLLNIAGDQIHQLLNQDVTVFLIQSKKVAASNSFGNRSI
SSSDKTHDAETLSWVIENESRAGKLTDTFPGSKFLCIPIGTNPVKGVISIRFTDETYIDT
YDNSILDSMLNDITLAIENVDLLKQTRQSILKAEREATRSNFLHSISHDIRTPLTSIMGN
LDMLKYHNEHLNDQQQAELLTASYGEAQYLHTLVTNILSLTKLESSDIQIQRTPYLVEEL
LEEFEEGLIRRHQANHVIIENEDDASLINIDSKLILQVLFNLIDNALKHAESHSEIKLHV
QHETNKIKFEMIDCGKGIPEEERQLIFNPYYSGDNFKDNKKDSLGLGLYLVQLILKQHNS
ELEYQPNTPQGSIFYFYLTVNPIEMEGAMDENNIIGR

CDS Information : SA0067

Genomic map

Staphylococcus aureus N315 chromosome

Location

Annotation

Comparative genome

Related links to external database

Computational search results

Calculated information (Amino acid sequence)

Sequence