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CDS Information : SA0109

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Staphylococcus aureus N315 chromosome

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Overview 
Genome

close this sectionLocation

Organism Staphylococcus aureus N315
Replicon chromosome
Start / Stop / Direction 126,460 / 125,543 / -
Location complement(125543..126460)
Type CDS
Length 918 bp (305 aa)

close this sectionAnnotation

Product iron-regulated ABC transporter siderophore permease protein SirC
Gene name sirC
Functional category Cell envelope and cellular processes
- Transport / binding proteins and lipoproteins
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Staphylococcus epidermidis ATCC 12228Staphylococcus epidermidis RP62A

close this sectionRelated links to external database

UniProtQ7A871
INSDBAB41328.1 (DDBJ GenBank EMBL)
RefSeqNP_373350.1
GI15925817
GeneID1122883
UniParcUPI00000CAA6D

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-166A6TXP8_STAA2Transport system permease proteinAlignment
2E=1e-166A5INY4_STAA9Transport system permease proteinAlignment
3E=1e-166D1R1B9_STAAUIron complex transport system permeaseAlignment
4E=1e-166D1QJH8_STAAUIron complex transport system permeaseAlignment
5E=1e-166C8N2D4_STAAUTransport system permeaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR000522 Bacterial transport system permease protein (Family)
 [2-300]  4.7e-85 PF01032
PF01032   FecCD
SignalP No significant hit
TMHMM 
 [32-54]  Transmembrane (o-i) [67-85]  Transmembrane (i-o) [89-111]  Transmembrane (o-i) [120-142]  Transmembrane (i-o) [169-186]  Transmembrane (o-i) [217-239]  Transmembrane (i-o) [254-276]  Transmembrane (o-i) [283-302]  Transmembrane (i-o)
Transmembrane 8   
SOSUI 
 [1-23]  Transmembrane [30-52]  Transmembrane [77-99]  Transmembrane [122-144]  Transmembrane [159-181]  Transmembrane [215-237]  Transmembrane [254-276]  Transmembrane [281-302]  Transmembrane
Transmembrane 8   

close this sectionCalculated information (Amino acid sequence)

size of protein 305 amino acids
molecular mass 32,652.09 Da
pI 10.77
aa composition
AlaValLeuIlePheTrpProMetGlySer
9.5
(29aa)		7.9
(24aa)		16.1
(49aa)		13.8
(42aa)		5.6
(17aa)		0.3
(1aa)		4.6
(14aa)		4.9
(15aa)		8.2
(25aa)		5.9
(18aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.6
(17aa)		0
(0aa)		1.6
(5aa)		3.3
(10aa)		1.6
(5aa)		4.6
(14aa)		1.3
(4aa)		2.3
(7aa)		2.3
(7aa)		0.7
(2aa)

open this sectionSequence