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CDS Information : SA0110

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Staphylococcus aureus N315 chromosome

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Overview 
Genome

close this sectionLocation

Organism Staphylococcus aureus N315
Replicon chromosome
Start / Stop / Direction 127,533 / 126,538 / -
Location complement(126538..127533)
Type CDS
Length 996 bp (331 aa)

close this sectionAnnotation

Product iron-regulated ABC transporter siderophore permease protein SirB
Gene name sirB
Functional category Cell envelope and cellular processes
- Transport / binding proteins and lipoproteins
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Staphylococcus epidermidis ATCC 12228Staphylococcus epidermidis RP62A

close this sectionRelated links to external database

UniProtQ7A870
INSDBAB41329.1 (DDBJ GenBank EMBL)
RefSeqNP_373351.1
GI15925818
GeneID1122884
UniParcUPI00000CAC47

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0Q99XA0_STAAMLipoproteinAlignment
2E=0Q7A870_STAANIron-regulated ABC transporter siderophore permease protein SirBAlignment
3E=0D0K797_STAADIron compound ABC transporter, permease protein SirBAlignment
4E=0A7WX65_STAA1LipoproteinAlignment
5E=0A6TXP9_STAA2Transport system permease proteinAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR000522 Bacterial transport system permease protein (Family)
 [16-325]  2.6e-89 PF01032
PF01032   FecCD
SignalP 
 [1-39]  0.985 Signal
Bacteria, Gram-positive   
TMHMM 
 [10-32]  Transmembrane (o-i) [62-81]  Transmembrane (i-o) [91-109]  Transmembrane (o-i) [116-138]  Transmembrane (i-o) [148-170]  Transmembrane (o-i) [195-217]  Transmembrane (i-o) [237-259]  Transmembrane (o-i) [279-301]  Transmembrane (i-o) [306-323]  Transmembrane (o-i)
Transmembrane 9   
SOSUI 
 [12-34]  Transmembrane [59-81]  Transmembrane [86-108]  Transmembrane [113-135]  Transmembrane [139-161]  Transmembrane [194-216]  Transmembrane [240-262]  Transmembrane [278-300]  Transmembrane [303-324]  Transmembrane
Transmembrane 9   

close this sectionCalculated information (Amino acid sequence)

size of protein 331 amino acids
molecular mass 35,539.43 Da
pI 10.6
aa composition
AlaValLeuIlePheTrpProMetGlySer
10.6
(35aa)		8.8
(29aa)		14.2
(47aa)		16
(53aa)		5.1
(17aa)		1.2
(4aa)		3.9
(13aa)		4.2
(14aa)		7.3
(24aa)		5.7
(19aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
4.8
(16aa)		0.3
(1aa)		3.3
(11aa)		3
(10aa)		1.2
(4aa)		3
(10aa)		0.9
(3aa)		3
(10aa)		2.4
(8aa)		0.9
(3aa)

open this sectionSequence