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CDS Information : SA0113

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Staphylococcus aureus N315 chromosome

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Overview 
Genome

close this sectionLocation

Organism Staphylococcus aureus N315
Replicon chromosome
Start / Stop / Direction 129,749 / 130,759 / +
Location 129749..130759
Type CDS
Length 1,011 bp (336 aa)

close this sectionAnnotation

Product putative ornithine cyclodeaminase
Gene name sbnB
Functional category Intermediary metabolism
- Metabolism of amino acids and related molecules
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Staphylococcus epidermidis ATCC 12228Staphylococcus epidermidis RP62A
[315] SE0315 1e-29(123)
ornithine cyclodeaminase (EC:4.3.1.12)
[187] SERP0192 1e-29(123)
ornithine cyclodeaminase (EC:4.3.1.12)

close this sectionRelated links to external database

UniProtQ7A868
INSDBAB41332.1 (DDBJ GenBank EMBL)
RefSeqNP_373354.1
GI15925821
GeneID1122887
UniParcUPI00000CACF1

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0Q99X98_STAAMProbable ornithine cyclodeaminase proteinAlignment
2E=0Q7A868_STAANPutative ornithine cyclodeaminaseAlignment
3E=0A7WX69_STAA1Putative uncharacterized proteinAlignment
4E=0A6TXQ2_STAA2Ornithine cyclodeaminaseAlignment
5E=0A5INY8_STAA9Ornithine cyclodeaminaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR003462 Ornithine cyclodeaminase/mu-crystallin (Family)
 [23-327]  3e-60 PF02423
PF02423   OCD_Mu_crystall
IPR007110 Immunoglobulin-like (Domain)
 [190-229]  6.978 PS50835
PS50835   IG_LIKE
IPR016040 NAD(P)-binding (Domain)
 [136-308]  2.1e-28 G3DSA:3.40.50.720
G3DSA:3.40.50.720   no description
 [5-336]  2e-76 SSF51735
SSF51735   NAD(P)-binding Rossmann-fold domains
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 336 amino acids
molecular mass 37,747.83 Da
pI 5.11
aa composition
AlaValLeuIlePheTrpProMetGlySer
8.3
(28aa)		6.3
(21aa)		6.8
(23aa)		9.8
(33aa)		3.3
(11aa)		1.2
(4aa)		3.3
(11aa)		3
(10aa)		6
(20aa)		6
(20aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
3.9
(13aa)		1.2
(4aa)		5.4
(18aa)		6.3
(21aa)		3
(10aa)		5.7
(19aa)		3.3
(11aa)		3.9
(13aa)		6.8
(23aa)		6.8
(23aa)

open this sectionSequence