DOGAN: CDS Information : SA0418

Display

Staphylococcus aureus N315 chromosome

Overview
Genome

Center position		change
ID		change
Gene name		change

Genome	Display	Sync
chromosome

Organism	Staphylococcus aureus N315
Replicon	chromosome
Start / Stop / Direction	479,707 / 480,612 / +
Location	479707..480612
Type	CDS
Length	906 bp (301 aa)

Product	cysteine synthase homologue
Gene name	cysM
Functional category	Intermediary metabolism - Metabolism of amino acids and related molecules
EC number
Note
KEGG pathway
Sequence feature
References

Table

Display	BBH1e-1001e-501e-101e-3

Staphylococcus epidermidis ATCC 12228	Staphylococcus epidermidis RP62A
[2324] SE2324 8e-126(442) cysteine synthase [2270] SE2270 2e-56(211) cysteine synthase [1662] SE1662 2e-08(52.4) threonine dehydratase (EC:4.3.1.19) [1010] SE1010 2e-05(42.7) threonine synthase [1053] SE1053 0.0002(39.3) tryptophan synthase subunit beta (EC:4.2.1.20)	[90] SERP0094 8e-126(442) cysteine synthase/cystathionine beta-synthase family protein [147] SERP0152 2e-56(211) cysteine synthase (EC:2.5.1.47)(cysK) [1636] SERP1673 2e-08(52.4) threonine dehydratase (EC:4.3.1.19)(ilvA) [875] SERP0898 2e-05(42.7) threonine synthase (EC:4.2.3.1)(thrC) [918] SERP0942 0.0002(39.3) tryptophan synthase subunit beta (EC:4.2.1.20)(trpB)

UniProt	Q7A7E4
INSD	BAB41648.1 (DDBJ GenBank EMBL)
RefSeq	NP_373670.1
GI	15926137
GeneID	1123203
UniParc	UPI00000D781E

BLASTP
Database:UniProtKB:2010_04

show BLAST table

1	E=1e-177	D1QZ86_STAAU	Cysteine synthase	Alignment
2	E=1e-177	D1QHC8_STAAU	Cysteine synthase	Alignment
3	E=1e-177	C8M6V4_STAAU	Cysteine synthase	Alignment
4	E=1e-177	C8M279_STAAU	Cysteine synthase	Alignment
5	E=1e-177	C8LQA4_STAAU	Cysteine synthase	Alignment

HAMAP

No significant hit

InterPro
Database:interpro:25.0

IPR001216 Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (Binding_site)
	PS00901 CYS_SYNTHASE
IPR001926 Pyridoxal phosphate-dependent enzyme, beta subunit (Domain)
	PF00291 PALP
	SSF53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes

SignalP

No significant hit

TMHMM

No significant hit

SOSUI

No significant hit

size of protein

301 amino acids

molecular mass

32,926.02 Da

pI

5.79

aa composition

Ala	Val	Leu	Ile	Phe	Trp	Pro	Met	Gly	Ser
9.3 (28aa)	6 (18aa)	8.3 (25aa)	6.6 (20aa)	3.7 (11aa)	0.7 (2aa)	3 (9aa)	1.7 (5aa)	10.6 (32aa)	6.3 (19aa)
Thr	Cys	Asn	Gln	Tyr	Lys	His	Arg	Asp	Glu
5 (15aa)	0.7 (2aa)	4.3 (13aa)	4.7 (14aa)	5 (15aa)	5.3 (16aa)	3.3 (10aa)	3.7 (11aa)	4.7 (14aa)	7.3 (22aa)

>SA0418 cysteine synthase homologue
ATGATTACTTATGATTTAATTGGCAATACACCATTAGTACTGTTAGAACATTATAGTGAT
GATAAAGTTAAAATTTATGCCAAGCTTGAACAATGGAATCCTGGAGGCAGTGTTAAAGAC
AGACTCGGGAAATATTTAGTAGAGAAGGCAATTCAAGAAGGGCGTGTGCGTGCAGGTCAA
ACTATTGTTGAAGCGACTGCTGGTAATACAGGCATAGGGTTAGCTATTGCAGCGAATAGA
CATCATTTGAAATGTAAGATCTTTGCGCCGTATGGTTTTTCAGAAGAAAAGATTAATATT
ATGATAGCGCTTGGTGCAGATGTTTCAAGGACGAGTCAGTCTGAAGGTATGCATGGGGCA
CAATTAGCTGCACGTTCCTATGCTGAAAAATATGGTGCCGTTTATATGAATCAATTTGAA
TCCGAACATAATCCGGATACATATTTTCATACATTGGGACCCGAATTGACTTCAGCATTA
CAGCAAATTGATTATTTTGTGGCTGGTATTGGCTCTGGCGGTACATTTACAGGTACCGCA
CGTTATTTAAAGCAACATCACGTGCAATGTTATGCCGTTGAGCCAGAAGGGTCCGTGTTA
AATGGAGGGCCAGCTCATGCACATGACACTGAAGGTATCGGTTCTGAGAAATGGCCGATA
TTTTTAGAGAGACGTCTTGTAGATGGGATATTTACGATTAAAGATCAAGATGCCTTTCGA
AATGTCAAAAGTTTGGCTATAAATGAAGGGTTGTTAGTAGGCAGTTCTTCAGGTGCAGCA
TTACAAGGTGCATTGAATTTAAAAGCGCAATTATCTGAAGGTACGATTGTTGTCGTATTT
CCAGATGGTAGCGATCGATATATGTCTAAGCAAATATTTAATTATGAGGAGAATGATTAT
GAATAA


>SA0418 cysteine synthase homologue
MITYDLIGNTPLVLLEHYSDDKVKIYAKLEQWNPGGSVKDRLGKYLVEKAIQEGRVRAGQ
TIVEATAGNTGIGLAIAANRHHLKCKIFAPYGFSEEKINIMIALGADVSRTSQSEGMHGA
QLAARSYAEKYGAVYMNQFESEHNPDTYFHTLGPELTSALQQIDYFVAGIGSGGTFTGTA
RYLKQHHVQCYAVEPEGSVLNGGPAHAHDTEGIGSEKWPIFLERRLVDGIFTIKDQDAFR
NVKSLAINEGLLVGSSSGAALQGALNLKAQLSEGTIVVVFPDGSDRYMSKQIFNYEENDY
E

CDS Information : SA0418

Genomic map

Staphylococcus aureus N315 chromosome

Location

Annotation

Comparative genome

Related links to external database

Computational search results

Calculated information (Amino acid sequence)

Sequence