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CDS Information : SA0588

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close this sectionGenomic map

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Staphylococcus aureus N315 chromosome

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Overview 
Genome

close this sectionLocation

Organism Staphylococcus aureus N315
Replicon chromosome
Start / Stop / Direction 682,501 / 681,665 / -
Location complement(681665..682501)
Type CDS
Length 837 bp (278 aa)

close this sectionAnnotation

Product conserved hypothetical protein
Gene name
Functional category Similar to unknown proteins
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Staphylococcus epidermidis ATCC 12228Staphylococcus epidermidis RP62A
[406] SE0406 1e-112(398)
hypothetical protein
[286] SERP0291 2e-112(398)
ABC transporter, permease protein(sitB)

close this sectionRelated links to external database

UniProtQ7A718
INSDBAB41820.1 (DDBJ GenBank EMBL)
RefSeqNP_373842.1
GI15926309
GeneID1123394
UniParcUPI00000547D1

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-149Q7A718_STAANPutative uncharacterized protein SA0588Alignment
2E=1e-149Q7A2W0_STAAMSimilar to ABC transporter, permease proteinAlignment
3E=1e-149Q7A1M7_STAAWPutative uncharacterized protein MW0594Alignment
4E=1e-149Q6GJ38_STAARABC transporter permease proteinAlignment
5E=1e-149Q6GBJ8_STAASABC transporter permease proteinAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR001626 ABC-3 (Family)
 [11-265]  2.7e-81 PF00950
PF00950   ABC-3
SignalP No significant hit
TMHMM 
 [13-35]  Transmembrane (i-o) [50-81]  Transmembrane (o-i) [93-115]  Transmembrane (i-o) [130-152]  Transmembrane (o-i) [165-187]  Transmembrane (i-o) [192-214]  Transmembrane (o-i) [221-243]  Transmembrane (i-o) [248-265]  Transmembrane (o-i)
Transmembrane 8   
SOSUI 
 [18-40]  Transmembrane [57-79]  Transmembrane [94-116]  Transmembrane [128-150]  Transmembrane [181-203]  Transmembrane [219-241]  Transmembrane [247-269]  Transmembrane
Transmembrane 7   

close this sectionCalculated information (Amino acid sequence)

size of protein 278 amino acids
molecular mass 30,104.38 Da
pI 9.78
aa composition
AlaValLeuIlePheTrpProMetGlySer
6.5
(18aa)		7.2
(20aa)		14
(39aa)		15.8
(44aa)		7.2
(20aa)		0
(0aa)		2.5
(7aa)		3.6
(10aa)		6.8
(19aa)		10.4
(29aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
9.7
(27aa)		0.7
(2aa)		2.5
(7aa)		0.7
(2aa)		4
(11aa)		2.5
(7aa)		1.4
(4aa)		2.2
(6aa)		1.4
(4aa)		0.7
(2aa)

open this sectionSequence