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CDS Information : SA0707

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close this sectionGenomic map

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Staphylococcus aureus N315 chromosome

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Overview 
Genome

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Organism Staphylococcus aureus N315
Replicon chromosome
Start / Stop / Direction 805,425 / 805,997 / +
Location 805425..805997
Type CDS
Length 573 bp (190 aa)

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Product conserved hypothetical protein
Gene name
Functional category Similar to unknown proteins
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Staphylococcus epidermidis ATCC 12228Staphylococcus epidermidis RP62A
[534] SE0534 7e-93(332)
hypothetical protein
[411] SERP0419 7e-93(332)
ribosomal subunit interface protein

close this sectionRelated links to external database

UniProtQ7A6R6
INSDBAB41940.1 (DDBJ GenBank EMBL)
RefSeqNP_373962.1
GI15926429
GeneID1123514
UniParcUPI0000054781

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-106D1GQR6_STAA0Putative S30EA family ribosomal proteinAlignment
2E=1e-106D0K325_STAADRibosomal subunit interface proteinAlignment
3E=1e-106A8Z027_STAATPossible ribosome-associated inhibitor protein YAlignment
4E=1e-106A7WZP7_STAA1Putative uncharacterized proteinAlignment
5E=1e-106A6TZN1_STAA2Ribosomal subunit interface proteinAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein (Domain)
 [4-99]  8.4e-29 PF02482
PF02482   Ribosomal_S30AE
 [2-111]  5.7e-29 SSF69754
SSF69754   Ribosome binding protein Y (YfiA homologue)
 [2-103]  1.2e-25 TIGR00741
TIGR00741   yfiA: ribosomal subunit interface protein
 [2-111]  2.2e-29 G3DSA:3.30.160.100
G3DSA:3.30.160.100   no description
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 190 amino acids
molecular mass 22,212.91 Da
pI 4.91
aa composition
AlaValLeuIlePheTrpProMetGlySer
4.7
(9aa)		6.8
(13aa)		6.8
(13aa)		8.4
(16aa)		3.7
(7aa)		0
(0aa)		1.6
(3aa)		2.1
(4aa)		4.2
(8aa)		4.2
(8aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
6.3
(12aa)		0
(0aa)		6.8
(13aa)		4.2
(8aa)		4.2
(8aa)		7.4
(14aa)		1.6
(3aa)		7.9
(15aa)		8.9
(17aa)		10
(19aa)

open this sectionSequence