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CDS Information : SA0709

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close this sectionGenomic map

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Staphylococcus aureus N315 chromosome

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Overview 
Genome

close this sectionLocation

Organism Staphylococcus aureus N315
Replicon chromosome
Start / Stop / Direction 809,375 / 810,367 / +
Location 809375..810367
Type CDS
Length 993 bp (330 aa)

close this sectionAnnotation

Product peptide chain release factor 2
Gene name prfB
Functional category Information pathways
- Protein synthesis
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Staphylococcus epidermidis ATCC 12228Staphylococcus epidermidis RP62A
[536] SE0536 1e-151(528)
peptide chain release factor RF-2
[] SERP0421 4e-152(529)
peptide chain release factor 2(prfB)

close this sectionRelated links to external database

UniProtQ7A6R4
INSDBAB41942.1 (DDBJ GenBank EMBL)
RefSeqNP_373964.1
GI15926431
GeneID1123516
UniParcUPI00000CAD02

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0D1GQR8_STAA0Peptide chain release factor 2Alignment
2E=0RF2_STAASPeptide chain release factor 2Alignment
3E=0RF2_STAANPeptide chain release factor 2Alignment
4E=0RF2_STAAMPeptide chain release factor 2Alignment
5E=0RF2_STAACPeptide chain release factor 2Alignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR000352 Class I peptide chain release factor (Domain)
 [206-222]  PS00745
PS00745   RF_PROK_I
 [188-299]  9.8e-42 PF00472
PF00472   RF-1
IPR004374 Peptide chain release factor 2 (Family)
 [1-327]  1.6e-204 TIGR00020
TIGR00020   prfB: peptide chain release factor
IPR005139 PCRF (Domain)
 [47-155]  1.3e-38 PF03462
PF03462   PCRF
IPR020853 Peptide chain release factor 2, bacterial (Family)
 [1-327]  36.564 MF_00094
MF_00094   RF2_MF_00094
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 330 amino acids
molecular mass 37,617.01 Da
pI 4.7
aa composition
AlaValLeuIlePheTrpProMetGlySer
7
(23aa)		5.2
(17aa)		6.7
(22aa)		7
(23aa)		3.3
(11aa)		1.2
(4aa)		3
(10aa)		3.3
(11aa)		6.7
(22aa)		5.2
(17aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
4.2
(14aa)		0.6
(2aa)		5.8
(19aa)		4.8
(16aa)		3.3
(11aa)		7
(23aa)		3.3
(11aa)		4.5
(15aa)		8.2
(27aa)		9.7
(32aa)

open this sectionSequence