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CDS Information : SA0729

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close this sectionGenomic map

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Staphylococcus aureus N315 chromosome

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Overview 
Genome

close this sectionLocation

Organism Staphylococcus aureus N315
Replicon chromosome
Start / Stop / Direction 835,146 / 835,907 / +
Location 835146..835907
Type CDS
Length 762 bp (253 aa)

close this sectionAnnotation

Product triosephosphate isomerase
Gene name tpi
Functional category Intermediary metabolism
- Metabolism of carbohydrates and related molecules
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Staphylococcus epidermidis ATCC 12228Staphylococcus epidermidis RP62A
[559] SE0559 1e-133(468)
triosephosphate isomerase(tpiA)
[435] SERP0444 1e-133(468)
triosephosphate isomerase (EC:5.3.1.1)(tpiA)

close this sectionRelated links to external database

UniProtP99133
INSDBAB41962.1 (DDBJ GenBank EMBL)
RefSeqNP_373984.1
GI15926451
GeneID1123537
UniParcUPI000013722C

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-146C8LWK0_STAAUTriosephosphate isomeraseAlignment
2E=1e-146C8LQQ9_STAAUTriosephosphate isomeraseAlignment
3E=1e-146C8LBY2_STAAUTriosephosphate isomeraseAlignment
4E=1e-146C8L2E8_STAAUTriosephosphate isomeraseAlignment
5E=1e-146C5QHF2_STAAUTriosephosphate isomeraseAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR000652 Triosephosphate isomerase (Family)
 [3-251]  84.303 PS51440
PS51440   TIM_2
 [4-248]  1.1e-93 PF00121
PF00121   TIM
 [5-243]  8.4e-53 TIGR00419
TIGR00419   tim: triose-phosphate isomerase
 [167-177]  PS00171
PS00171   TIM_1
 [1-252]  7e-98 SSF51351
SSF51351   Triosephosphate isomerase (TIM)
IPR013785 Aldolase-type TIM barrel (Domain)
 [2-252]  3.7e-88 G3DSA:3.20.20.70
G3DSA:3.20.20.70   no description
IPR020861 Triosephosphate isomerase, active site (Active_site)
 [167-177]  PS00171
PS00171   TIM_1
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 253 amino acids
molecular mass 27,261.72 Da
pI 4.52
aa composition
AlaValLeuIlePheTrpProMetGlySer
10.7
(27aa)		8.7
(22aa)		5.9
(15aa)		6.7
(17aa)		2.8
(7aa)		0.8
(2aa)		3.2
(8aa)		2
(5aa)		8.3
(21aa)		5.9
(15aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
6.3
(16aa)		1.2
(3aa)		4
(10aa)		4
(10aa)		2
(5aa)		7.9
(20aa)		1.6
(4aa)		2.4
(6aa)		5.5
(14aa)		10.3
(26aa)

open this sectionSequence