CDS Information : SA1009
open/close allGenomic map
| Cell envelope and cellular processes |
| Cell wall |
| Transformation / competence |
| Transport / binding proteins and lipoproteins |
| Sensors (signal transduction) |
| Membrane bioenergetics (electron transport chain and ATP synthase) |
| Mobility and chemotaxis no ORFs |
| Protein secretion |
| Cell division |
| Sporulation |
| Germination |
| Intermediary metabolism |
| Metabolism of carbohydrates and related molecules |
| Metabolism of amino acids and related molecules |
| Metabolism of nucleotides and nucleic acids |
| Metabolism of lipids |
| Metabolism of coenzymes and prosthetic groups |
| Metabolism of phosphate |
| Metabolism of sulfur |
| Information pathways |
| DNA replication |
| DNA modification and repair |
| DNA recombination |
| DNA packaging and segregation |
| RNA synthesis |
| RNA modification |
| Protein synthesis |
| Protein modification |
| Protein folding |
| Other functions |
| Adaption to atypical conditions |
| Detoxification |
| Antibiotic production |
| Phage-related functions |
| Transposon and IS |
| Pathogenic factors (toxins and colonization factors) |
| Miscellaneous |
| Similar to unknown proteins |
| No similarity |
| not classified |
Location
| Organism |
Staphylococcus aureus N315 |
| Replicon |
chromosome |
| Start / Stop / Direction |
1,143,727 / 1,143,011 / - |
| Location |
complement(1143011..1143727) |
| Type |
CDS |
| Length |
717 bp (238 aa) |
Annotation
| Product |
hypothetical protein, similar to exotoxin 1 |
| Gene name |
|
| Functional category |
Other functions
- Pathogenic factors (toxins and colonization factors) |
| EC number |
|
| Note |
|
| KEGG pathway |
|
| Sequence feature |
|
| References |
|
Related links to external database
Computational search results
BLASTP
Database:UniProtKB:2010_04
|
|
| HAMAP |
No significant hit |
InterPro
Database:interpro:25.0
|
| IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp (Domain) |  ![[149-235] 2e-11 PF02876](/dogan/img/H.gif "[149-235] 2e-11 PF02876")
| PF02876 Stap_Strp_tox_C | ![[167-190] PS00278](/dogan/img/P.gif "[167-190] PS00278")
| PS00278 STAPH_STREP_TOXIN_2 | | IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site (Conserved_site) |
| PS00278 STAPH_STREP_TOXIN_2 | | IPR015282 Staphylococcal toxin DUF1954 (Domain) |
| PF09199 DUF1954 | | IPR016091 Superantigen toxin, C-terminal, Staphylococcal/Streptococcal (Domain) | ![[136-238] 1.3e-24 SSF54334](/dogan/img/B.gif "[136-238] 1.3e-24 SSF54334")
| SSF54334 Superantigen toxins, C-terminal domain | ![[111-238] 1.3e-16 G3DSA:3.10.20.120](/dogan/img/X2.gif "[111-238] 1.3e-16 G3DSA:3.10.20.120")
| G3DSA:3.10.20.120 no description |
|
| SignalP |
|
| TMHMM |
No significant hit |
| SOSUI |
No significant hit |
Calculated information (Amino acid sequence)
| size of protein |
238 amino acids |
| molecular mass |
27,555.39 Da |
| pI |
9.83 |
| aa composition |
| Ala | Val | Leu | Ile | Phe | Trp | Pro | Met | Gly | Ser |
|---|
4.2
(10aa) | 5
(12aa) | 10.1
(24aa) | 7.6
(18aa) | 3.8
(9aa) | 2.5
(6aa) | 2.9
(7aa) | 0.4
(1aa) | 5.9
(14aa) | 5.9
(14aa) |
| Thr | Cys | Asn | Gln | Tyr | Lys | His | Arg | Asp | Glu |
|---|
7.6
(18aa) | 0
(0aa) | 8.4
(20aa) | 4.2
(10aa) | 6.7
(16aa) | 10.5
(25aa) | 1.7
(4aa) | 2.9
(7aa) | 5.9
(14aa) | 3.8
(9aa) |
|
Sequence
>SA1009 hypothetical protein, similar to exotoxin 1
ATGAGTAAGAACATCACGAAAAATATAATTTTAACGACAACATTATTACTATTAGGTACT
GTATTACCTCAAAATCAAAAACCAGTATTTAGTTTTTACTCTGAAGCTAAAGCTTATAGC
ATTGGTCAAGATGAAACTAACATCAATGAATTAATTAAATATTACACACAGCCTCATTTT
TCATTTTCAAATAAATGGCTATATCAATATGATAATGGAAACATTTATGTTGAACTTAAG
AGATATTCATGGTCAGCACATATATCTTTATGGGGCGCTGAAAGTTGGGGAAATATTAAT
CAGTTAAAAGATCGTTACGTAGATGTGTTTGGACTAAAAGACAAAGATACTGATCAGTTA
TGGTGGTCTTATAGAGAGACATTTACAGGTGGCGTTACACCAGCCGCAAAACCTTCTGAT
AAAACTTATAATCTTTTTGTGCAATACAAAGATAAACTACAAACGATTATTGGTGCGCAT
AAAATATACCAAGGCAATAAACCAGTATTAACATTGAAAGAAATCGATTTCCGTGCACGA
GAAGCGTTAATAAAAAATAAAATATTATATACCGAAAATCGTAATAAAGGTAAGCTTAAG
ATCACCGGTGGCGGTAATAACTACACTATTGATTTAAGCAAAAGATTACATTCAGATCTA
GCAAATGTTTATGTTAAAAATCCTAATAAAATAACTGTTGACGTCCTCTTTGATTAG
>SA1009 hypothetical protein, similar to exotoxin 1
MSKNITKNIILTTTLLLLGTVLPQNQKPVFSFYSEAKAYSIGQDETNINELIKYYTQPHF
SFSNKWLYQYDNGNIYVELKRYSWSAHISLWGAESWGNINQLKDRYVDVFGLKDKDTDQL
WWSYRETFTGGVTPAAKPSDKTYNLFVQYKDKLQTIIGAHKIYQGNKPVLTLKEIDFRAR
EALIKNKILYTENRNKGKLKITGGGNNYTIDLSKRLHSDLANVYVKNPNKITVDVLFD
![[1-31] 0.999 Signal](/dogan/img/R.gif "[1-31] 0.999 Signal"){kind=small}