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CDS Information : SA1142

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close this sectionGenomic map

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Staphylococcus aureus N315 chromosome

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Overview 
Genome

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Organism Staphylococcus aureus N315
Replicon chromosome
Start / Stop / Direction 1,299,244 / 1,300,965 / +
Location 1299244..1300965
Type CDS
Length 1,722 bp (573 aa)

close this sectionAnnotation

Product aerobic glycerol-3-phosphate dehydrogenase
Gene name glpD
Functional category Intermediary metabolism
- Metabolism of carbohydrates and related molecules
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Staphylococcus epidermidis ATCC 12228Staphylococcus epidermidis RP62A
[979] SE0979 0(950)
aerobic glycerol-3-phosphate dehydrogenase
[848] SERP0868 0(950)
aerobic glycerol-3-phosphate dehydrogenase (EC:1.1.5.3)(glpD)

close this sectionRelated links to external database

UniProtQ7A5V7 : N-term changed (+48)
INSDBAB42396.1 (DDBJ GenBank EMBL)
RefSeqNP_374417.1
GI15926884
GeneID1123975
UniParcUPI00004B5BD1 : N-term changed (+48)

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0A8Z1X1_STAATGlycerol-3-phosphate dehydrogenaseAlignment
2E=0A7X1U4_STAA1Aerobic glycerol-3-phosphate dehydrogenaseAlignment
3E=0D3EW46_STAAUAerobic glycerol-3-phosphate dehydrogenaseAlignment
4E=0D1QWX7_STAAUGlycerol-3-phosphate dehydrogenaseAlignment
5E=0D1QHQ6_STAAUGlycerol-3-phosphate dehydrogenaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase (Domain)
 [36-48]  4.3e-30 PR01001 [49-59]  4.3e-30 PR01001 [65-77]  4.3e-30 PR01001 [110-122]  4.3e-30 PR01001 [354-360]  4.3e-30 PR01001 [384-396]  4.3e-30 PR01001
PR01001   FADG3PDH
 [389-399]  PS00978
PS00978   FAD_G3PDH_2
 [41-58]  PS00977
PS00977   FAD_G3PDH_1
IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase (Family)
 [36-48]  4.3e-30 PR01001 [49-59]  4.3e-30 PR01001 [65-77]  4.3e-30 PR01001 [110-122]  4.3e-30 PR01001 [354-360]  4.3e-30 PR01001 [384-396]  4.3e-30 PR01001
PR01001   FADG3PDH
 [41-58]  PS00977
PS00977   FAD_G3PDH_1
 [389-399]  PS00978
PS00978   FAD_G3PDH_2
IPR006076 FAD dependent oxidoreductase (Domain)
 [37-392]  5.8e-59 PF01266
PF01266   DAO
IPR006076 FAD dependent oxidoreductase (Family)
 [37-392]  5.8e-59 PF01266
PF01266   DAO
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 573 amino acids
molecular mass 64,463.38 Da
pI 8.23
aa composition
AlaValLeuIlePheTrpProMetGlySer
6.6
(38aa)		7.5
(43aa)		7
(40aa)		6.3
(36aa)		3.8
(22aa)		0.9
(5aa)		2.8
(16aa)		2.8
(16aa)		8.7
(50aa)		5.4
(31aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.6
(32aa)		0.2
(1aa)		3.8
(22aa)		3.3
(19aa)		4.9
(28aa)		9.6
(55aa)		1.6
(9aa)		4.9
(28aa)		7.3
(42aa)		7
(40aa)

open this sectionSequence