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CDS Information : SA1347

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Staphylococcus aureus N315 chromosome

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Overview 
Genome

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Organism Staphylococcus aureus N315
Replicon chromosome
Start / Stop / Direction 1,557,790 / 1,556,807 / -
Location complement(1556807..1557790)
Type CDS
Length 984 bp (327 aa)

close this sectionAnnotation

Product branched-chain alpha-keto acid dehydrogenase E1
Gene name bfmBAB
Functional category Intermediary metabolism
- Metabolism of amino acids and related molecules
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Display BBH1e-1001e-501e-101e-3
Staphylococcus epidermidis ATCC 12228Staphylococcus epidermidis RP62A
[1197] SE1197 5e-176(609)
branched-chain alpha-keto acid dehydrogenase E1
[1052] SERP1077 2e-176(610)
2-oxoisovalerate dehydrogenase, E1 component, beta subunit (EC:1.2.4.1)

close this sectionRelated links to external database

UniProtQ7A5F8
INSDBAB42609.1 (DDBJ GenBank EMBL)
RefSeqNP_374630.1
GI15927097
GeneID1124187
UniParcUPI00000D77FE

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0Q99TX7_STAAMBranched-chain alpha-keto acid dehydrogenase E1Alignment
2E=0Q7A5F8_STAANBranched-chain alpha-keto acid dehydrogenase E1Alignment
3E=0Q7A0T8_STAAWBranched-chain alpha-keto acid dehydrogenase E1Alignment
4E=0Q6G949_STAAS2-oxoisovalerate dehydrogenase beta subunitAlignment
5E=0D0K599_STAAD2-oxoisovalerate dehydrogenase, E1 component, beta subunitAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR005475 Transketolase, central region (Domain)
 [4-179]  4.6e-63 SM00861
SM00861   no description
 [3-178]  1.9e-51 PF02779
PF02779   Transket_pyr
IPR005476 Transketolase, C-terminal (Domain)
 [194-317]  1.1e-35 PF02780
PF02780   Transketolase_C
IPR009014 Transketolase, C-terminal-like (Domain)
 [188-327]  2.5e-46 SSF52922
SSF52922   TK C-terminal domain-like
 [197-327]  1.4e-37 G3DSA:3.40.50.920
G3DSA:3.40.50.920   no description
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 327 amino acids
molecular mass 36,010.29 Da
pI 4.43
aa composition
AlaValLeuIlePheTrpProMetGlySer
8.9
(29aa)
7
(23aa)
9.8
(32aa)
8
(26aa)
3.7
(12aa)
0.3
(1aa)
5.5
(18aa)
3.1
(10aa)
7
(23aa)
5.5
(18aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
4.3
(14aa)
1.2
(4aa)
4
(13aa)
4
(13aa)
3.7
(12aa)
5.2
(17aa)
1.2
(4aa)
3.7
(12aa)
6.1
(20aa)
8
(26aa)

open this sectionSequence