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CDS Information : SA1643

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Staphylococcus aureus N315 chromosome

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Overview 
Genome

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Organism Staphylococcus aureus N315
Replicon chromosome
Start / Stop / Direction 1,878,145 / 1,877,369 / -
Location complement(1877369..1878145)
Type CDS
Length 777 bp (258 aa)

close this sectionAnnotation

Product enterotoxin SeN [Pathogenicity island SaPIn3]
Gene name sen
Functional category Other functions
- Pathogenic factors (toxins and colonization factors)
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionRelated links to external database

UniProtQ7A4X1
INSDBAB42911.1 (DDBJ GenBank EMBL)
RefSeqNP_374932.1
GI15927399
GeneID1124486
UniParcUPI00000CABF7

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-144Q7A4X1_STAANEnterotoxin SeNAlignment
2E=1e-144Q7A2Q6_STAAMEnterotoxinAlignment
3E=1e-144A7X3S6_STAA1EnterotoxinAlignment
4E=1e-144Q9EZM4_STAAUSENAlignment
5E=1e-144D3EXL9_STAAUEnterotoxin SeNAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp (Domain)
 [151-256]  7.2e-30 PF02876
PF02876   Stap_Strp_tox_C
 [172-195]  PS00278
PS00278   STAPH_STREP_TOXIN_2
IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site (Conserved_site)
 [172-195]  PS00278
PS00278   STAPH_STREP_TOXIN_2
IPR006173 Staphylococcal/Streptococcal toxin, OB-fold (Domain)
 [51-142]  2.2e-27 PF01123
PF01123   Stap_Strp_toxin
IPR006177 Toxin, bacterial (Domain)
 [133-145]  1.1e-07 PR00279 [172-188]  1.1e-07 PR00279
PR00279   BACTRLTOXIN
IPR006177 Toxin, bacterial (Family)
 [133-145]  1.1e-07 PR00279 [172-188]  1.1e-07 PR00279
PR00279   BACTRLTOXIN
IPR008992 Enterotoxin, bacterial (Domain)
 [28-144]  8.5e-36 SSF50203
SSF50203   Bacterial enterotoxins
IPR013307 Bacterial superantigen (Family)
 [97-123]  3.4e-28 PR01898 [131-144]  3.4e-28 PR01898 [172-185]  3.4e-28 PR01898 [185-199]  3.4e-28 PR01898 [238-254]  3.4e-28 PR01898
PR01898   SAGSUPRFAMLY
IPR016091 Superantigen toxin, C-terminal, Staphylococcal/Streptococcal (Domain)
 [112-258]  1.9e-40 G3DSA:3.10.20.120
G3DSA:3.10.20.120   no description
 [136-258]  1.2e-37 SSF54334
SSF54334   Superantigen toxins, C-terminal domain
SignalP 
 [1-31]  0.999 Signal
Bacteria, Gram-positive   
TMHMM 
 [7-29]  Transmembrane (i-o)
Transmembrane 1   
SOSUI 
 [7-29]  Transmembrane
Transmembrane 1   

close this sectionCalculated information (Amino acid sequence)

size of protein 258 amino acids
molecular mass 29,675.80 Da
pI 8.26
aa composition
AlaValLeuIlePheTrpProMetGlySer
2.3
(6aa)		7
(18aa)		9.7
(25aa)		8.1
(21aa)		5.8
(15aa)		0.4
(1aa)		0
(0aa)		0.8
(2aa)		5.4
(14aa)		7.4
(19aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.8
(15aa)		1.6
(4aa)		8.9
(23aa)		4.3
(11aa)		5.8
(15aa)		11.6
(30aa)		1.9
(5aa)		1.2
(3aa)		7.8
(20aa)		4.3
(11aa)

open this sectionSequence