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CDS Information : SA1874

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close this sectionGenomic map

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Staphylococcus aureus N315 chromosome

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Overview 
Genome

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Organism Staphylococcus aureus N315
Replicon chromosome
Start / Stop / Direction 2,122,934 / 2,121,786 / -
Location complement(2121786..2122934)
Type CDS
Length 1,149 bp (382 aa)

close this sectionAnnotation

Product alanine racemase
Gene name alr
Functional category Intermediary metabolism
- Metabolism of amino acids and related molecules
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Staphylococcus epidermidis ATCC 12228Staphylococcus epidermidis RP62A
[1674] SE1674 6e-162(562)
alanine racemase
[1646] SERP1683 6e-162(562)
alanine racemase (EC:5.1.1.1)(alr)

close this sectionRelated links to external database

UniProtP63480
INSDBAB43157.1 (DDBJ GenBank EMBL)
RefSeqNP_375178.1
GI15927645
GeneID1124774
UniParcUPI00001258C8

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0C5QDG2_STAAUAlanine racemaseAlignment
2E=0D0K6V8_STAADAlanine racemaseAlignment
3E=0A7X4P7_STAA1Alanine racemaseAlignment
4E=0A6U3F6_STAA2Alanine racemaseAlignment
5E=0A5IUL6_STAA9Alanine racemaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR000821 Alanine racemase region (Domain)
 [31-47]  4.2e-62 PR00992 [67-85]  4.2e-62 PR00992 [129-141]  4.2e-62 PR00992 [164-175]  4.2e-62 PR00992 [202-229]  4.2e-62 PR00992 [260-275]  4.2e-62 PR00992 [277-292]  4.2e-62 PR00992 [297-314]  4.2e-62 PR00992 [351-364]  4.2e-62 PR00992
PR00992   ALARACEMASE
 [6-369]  33.209 MF_01201
MF_01201   ALR_MF_01201
 [7-370]  1.1e-121 TIGR00492
TIGR00492   alr: alanine racemase
 [36-46]  PS00395
PS00395   ALANINE_RACEMASE
IPR001608 Alanine racemase, N-terminal (Domain)
 [13-229]  1.6e-56 PF01168
PF01168   Ala_racemase_N
IPR009006 Alanine racemase/group IV decarboxylase, C-terminal (Domain)
 [231-368]  2.3e-47 G3DSA:2.40.37.10
G3DSA:2.40.37.10   no description
 [225-382]  3e-60 SSF50621
SSF50621   Alanine racemase C-terminal domain-like
IPR011079 Alanine racemase, C-terminal (Domain)
 [245-368]  1.1e-43 PF00842
PF00842   Ala_racemase_C
IPR020622 Alanine racemase, pyridoxal-phosphate attachment site (Binding_site)
 [36-46]  PS00395
PS00395   ALANINE_RACEMASE
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 382 amino acids
molecular mass 42,809.20 Da
pI 7.12
aa composition
AlaValLeuIlePheTrpProMetGlySer
7.6
(29aa)		9.7
(37aa)		8.1
(31aa)		6.8
(26aa)		2.9
(11aa)		0.5
(2aa)		3.4
(13aa)		2.9
(11aa)		6
(23aa)		5
(19aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.8
(22aa)		1.8
(7aa)		4.7
(18aa)		6
(23aa)		4.7
(18aa)		6.5
(25aa)		3.1
(12aa)		3.7
(14aa)		5
(19aa)		5.8
(22aa)

open this sectionSequence