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CDS Information : SAV0030

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close this sectionGenomic map

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Streptomyces avermitilis MA-4680T (= NBRC 14893T) chromosome

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Overview 
Genome

close this sectionLocation

Organism Streptomyces avermitilis MA-4680T (= NBRC 14893T)
Replicon chromosome
Start / Stop / Direction 37,653 / 38,609 / +
Location 37653..38609
Type CDS
Length 957 bp (318 aa)

close this sectionAnnotation

Product hypothetical protein
Gene name
Functional category Other
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionRelated links to external database

UniProtQ82RW2
INSDBAC67739.1 (DDBJ GenBank EMBL)
RefSeqNP_821204.1
GI29826570
GeneID1211782
UniParcUPI0000183E90

close this sectionComputational search results

BLASTP
Database:: 		No significant hit
HAMAP No significant hit
InterPro No significant hit
SignalP No significant hit
TMHMM 
 [63-85]  Transmembrane (i-o) [118-135]  Transmembrane (o-i) [140-162]  Transmembrane (i-o) [177-199]  Transmembrane (o-i) [212-231]  Transmembrane (i-o) [291-308]  Transmembrane (o-i)
Transmembrane 6   
SOSUI 
 [64-86]  Transmembrane [119-136]  Transmembrane [138-160]  Transmembrane [183-204]  Transmembrane [211-233]  Transmembrane [247-269]  Transmembrane [286-307]  Transmembrane
Transmembrane 7   

close this sectionCalculated information (Amino acid sequence)

size of protein 318 amino acids
molecular mass 34,281.33 Da
pI 10.56
aa composition
AlaValLeuIlePheTrpProMetGlySer
17.9
(57aa)		6.3
(20aa)		15.4
(49aa)		4.7
(15aa)		2.5
(8aa)		3.8
(12aa)		7.2
(23aa)		1.3
(4aa)		8.2
(26aa)		3.8
(12aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
4.4
(14aa)		1.3
(4aa)		0.3
(1aa)		3.5
(11aa)		2.8
(9aa)		0.9
(3aa)		2.5
(8aa)		8.2
(26aa)		3.1
(10aa)		1.9
(6aa)

open this sectionSequence