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CDS Information : SAV5606

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Streptomyces avermitilis MA-4680T (= NBRC 14893T) chromosome

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Overview 
Genome

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Organism Streptomyces avermitilis MA-4680T (= NBRC 14893T)
Replicon chromosome
Start / Stop / Direction 6,781,453 / 6,782,664 / +
Location 6781453..6782664
Type CDS
Length 1,212 bp (403 aa)

close this sectionAnnotation

Product putative neuramidase
Gene name
Functional category Annotated
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComputational search results

BLASTP
Database::
No significant hit
HAMAP No significant hit
InterPro No significant hit
SignalP
 [1-31]  1 Signal
Bacteria, Gram-positive   
TMHMM
 [9-31]  Transmembrane (i-o)
Transmembrane 1   
SOSUI
 [6-28]  Transmembrane
Transmembrane 1   

close this sectionCalculated information (Amino acid sequence)

size of protein 403 amino acids
molecular mass 42,111.83 Da
pI 8.57
aa composition
AlaValLeuIlePheTrpProMetGlySer
12.9
(52aa)
9.2
(37aa)
6.9
(28aa)
2.2
(9aa)
2.2
(9aa)
1
(4aa)
6.7
(27aa)
0.7
(3aa)
12.4
(50aa)
6.7
(27aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
8.7
(35aa)
0.5
(2aa)
3
(12aa)
2.7
(11aa)
4
(16aa)
0.7
(3aa)
1.2
(5aa)
8.9
(36aa)
6.2
(25aa)
3
(12aa)

open this sectionSequence