small fontnormal fontlarge fontmail to

CDS Information : SH0010

close allopen/close all

close this sectionGenomic map

Display

Staphylococcus haemolyticus JCSC1435 chromosome

 Legend Jump
Overview 
Genome

close this sectionLocation

Organism Staphylococcus haemolyticus JCSC1435
Replicon chromosome
Start / Stop / Direction 13,759 / 14,088 / +
Location 13759..14088
Type CDS
Length 330 bp (109 aa)

close this sectionAnnotation

Product similar to unknown protein
Gene name
Functional category Similar to unknown proteins
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Staphylococcus epidermidis ATCC 12228Staphylococcus epidermidis RP62A
[10] SE0010 6e-36(141)
hypothetical protein
[2481] SERP2542 6e-36(141)
hypothetical protein

close this sectionRelated links to external database

UniProtQ4LAK6
INSDBAE03319.1 (DDBJ GenBank EMBL)
RefSeqYP_251925.1
GI70725011
UniParcUPI000054B5A7

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=3e-52Q4LAK6_STAHJSimilar to unknown proteinAlignment
2E=1e-36C2LZZ1_STAHOBranched-chain amino acid transport proteinAlignment
3E=2e-33C4WBG1_STAWABranched-chain amino acid transportAlignment
4E=1e-32D1WJ72_STAEPBranched-chain amino acid transport proteinAlignment
5E=1e-32C5QAN2_STAEPLIV-E family amino acid exporter AzlDAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR008407 Branched-chain amino acid transport (Family)
 [7-106]  6.1e-18 PF05437
PF05437   AzlD
SignalP No significant hit
TMHMM 
 [7-29]  Transmembrane (i-o) [39-58]  Transmembrane (o-i) [65-87]  Transmembrane (i-o) [91-108]  Transmembrane (o-i)
Transmembrane 4   
SOSUI 
 [8-30]  Transmembrane [38-60]  Transmembrane [63-85]  Transmembrane [88-109]  Transmembrane
Transmembrane 4   

close this sectionCalculated information (Amino acid sequence)

size of protein 109 amino acids
molecular mass 12,214.96 Da
pI 8.53
aa composition
AlaValLeuIlePheTrpProMetGlySer
3.7
(4aa)		11
(12aa)		15.6
(17aa)		15.6
(17aa)		9.2
(10aa)		1.8
(2aa)		3.7
(4aa)		2.8
(3aa)		5.5
(6aa)		4.6
(5aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
11.9
(13aa)		0.9
(1aa)		0.9
(1aa)		2.8
(3aa)		0.9
(1aa)		0.9
(1aa)		0.9
(1aa)		3.7
(4aa)		0.9
(1aa)		2.8
(3aa)

open this sectionSequence