DOGAN: CDS Information : SH0019

Display

Staphylococcus haemolyticus JCSC1435 chromosome

Overview
Genome

Center position		change
ID		change
Gene name		change

Genome	Display	Sync
chromosome

Organism	Staphylococcus haemolyticus JCSC1435
Replicon	chromosome
Start / Stop / Direction	25,706 / 27,037 / +
Location	25706..27037
Type	CDS
Length	1,332 bp (443 aa)

Product	similar to unknown protein
Gene name
Functional category	Similar to unknown proteins
EC number
Note
KEGG pathway
Sequence feature
References

Table

Display	BBH1e-1001e-501e-101e-3

Staphylococcus epidermidis ATCC 12228	Staphylococcus epidermidis RP62A
[20] SE0020 7e-160(556) hypothetical protein	[2471] SERP2532 5e-160(556) YycH protein(yycH)

UniProt	Q4LAJ7
INSD	BAE03328.1 (DDBJ GenBank EMBL)
RefSeq	YP_251934.1
GI	70725020
UniParc	UPI000054B5B0

BLASTP
Database:UniProtKB:2010_04

show BLAST table

1	E=0	Q4LAJ7_STAHJ	Similar to unknown protein	Alignment
2	E=0	C2LZY2_STAHO	YycH protein	Alignment
3	E=1e-165	D2UVV0_STAAU	YycH protein	Alignment
4	E=1e-165	D2GIA4_STAAU	Putative uncharacterized protein	Alignment
5	E=1e-165	D2GDD3_STAAU	Putative uncharacterized protein	Alignment

HAMAP

No significant hit

InterPro
Database:interpro:25.0

IPR009996 YycH (Family)
	PF07435 YycH

SignalP

Bacteria, Gram-positive

TMHMM

Transmembrane 1

SOSUI

Transmembrane 1

size of protein

443 amino acids

molecular mass

50,811.96 Da

pI

5.46

aa composition

Ala	Val	Leu	Ile	Phe	Trp	Pro	Met	Gly	Ser
2.9 (13aa)	7.2 (32aa)	7 (31aa)	6.3 (28aa)	4.3 (19aa)	0.9 (4aa)	3.6 (16aa)	3.4 (15aa)	4.3 (19aa)	9 (40aa)
Thr	Cys	Asn	Gln	Tyr	Lys	His	Arg	Asp	Glu
7 (31aa)	0 (0aa)	8.4 (37aa)	2.7 (12aa)	4.7 (21aa)	7.9 (35aa)	2.9 (13aa)	3.2 (14aa)	8.4 (37aa)	5.9 (26aa)

>SH0019 similar to unknown protein
ATGAAGAGTAAAGAGCATATTAAATCCATTATTCTTTTCCTACTAGTCATGATGAGTGTT
GTGCTTACGTTTATGGTGTGGAATTTCTCACCAGATTTAAATAATATTGATAGCACAGAT
AGTAAAAAGAGCAATACTAAGACGATTGGTAAGCCCATGTCTGCCAATATAGAGAATGTG
ATATCTCCGTATCAAATTGTAGAAGTTAAAGGCGATAAGGTTAAAGGGCTGGCACCATCT
CGTGCTCAATTGTCTCAAGTAACAGGTACATTGAAGAATCATGAAGTCAGTAAAGTGGAA
CATATTCATCGAGATTATAATTTAAATATTCCCATGTTAAATGACCACTTTACTGTGCTA
GATTTCACTTATGATATGCCGCTAACGACATATCTAGGTCAAGTATTGAATTCATCAGCG
AAAGTACCTAAAAATTTCAAATTTAATCGTATTATAGTAAGTCAAAATCCTAAAGAGAAT
TTAGAATTGTATGCGATAAGTGAAGATCGTCATGAAGTAATGAAAGTAACGTTGACTACG
AAAGCTAATCATTTTATTAAAGTTATGGATCATTTGAATAAAGAAATGCAGAAATATTCA
GAGGTAATCACAAATAAAGATACGATTGATAAAGCAACGCATATATTTGCGCCAAATCGT
CCGAAAGACATGCGTTCTTACCGTATGGTTTATGATACGATTCCAGTCGAAACGATGAAT
GCTATTCTATTTGACGACTCAGTGATTATTCGAAGCGGTAAGAGTGGTTCAACAACGTAC
AATAATAACACTGGCGTAGCGAACTATAATGATGAAAGTAAGAAATATCATTATAAGAAT
TTATCTGAAGATGAATCTAGCTCAAGTGATATGGATTCAACGATTCCAAGTACATTTGAA
TATATCAATGGACATGGTGGATTCTTTAATGATGACTTCCGTCTTTTCAATACAGATAAT
TCATCGGGTGAATTAACGTATCAACTCTTCCTCAATGGCCACCCAACATTTAATGATCAG
CAATTAAATGATATAGAGGTCACTTGGGGAGATAAAGGCATTTATGACTATAAACGTGCG
CTATTGCGTTCTAGTGTACCTCTAGAAGGTAAAACGAAGTCGCTAGATAGTGTTGAAAGT
GTTCGTTCTTCACTCGCAAATAATCATACGATTGATTTCGAAAAGGTAACGAATATGGTC
ATTGGTTATAAAGAAGATGATCAACCTGATAAAGATGATATAGAAGTGCAACGTAATAGT
GAGTTTGTGCCAACATGGTATGTTCAATACGACGGCGATTGGTACGCTTATGAGGATGGG
AGGCTTGAATAA


>SH0019 similar to unknown protein
MKSKEHIKSIILFLLVMMSVVLTFMVWNFSPDLNNIDSTDSKKSNTKTIGKPMSANIENV
ISPYQIVEVKGDKVKGLAPSRAQLSQVTGTLKNHEVSKVEHIHRDYNLNIPMLNDHFTVL
DFTYDMPLTTYLGQVLNSSAKVPKNFKFNRIIVSQNPKENLELYAISEDRHEVMKVTLTT
KANHFIKVMDHLNKEMQKYSEVITNKDTIDKATHIFAPNRPKDMRSYRMVYDTIPVETMN
AILFDDSVIIRSGKSGSTTYNNNTGVANYNDESKKYHYKNLSEDESSSSDMDSTIPSTFE
YINGHGGFFNDDFRLFNTDNSSGELTYQLFLNGHPTFNDQQLNDIEVTWGDKGIYDYKRA
LLRSSVPLEGKTKSLDSVESVRSSLANNHTIDFEKVTNMVIGYKEDDQPDKDDIEVQRNS
EFVPTWYVQYDGDWYAYEDGRLE

CDS Information : SH0019

Genomic map

Staphylococcus haemolyticus JCSC1435 chromosome

Location

Annotation

Comparative genome

Related links to external database

Computational search results

Calculated information (Amino acid sequence)

Sequence