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CDS Information : SH0045

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close this sectionGenomic map

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Staphylococcus haemolyticus JCSC1435 chromosome

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Overview 
Genome

close this sectionLocation

Organism Staphylococcus haemolyticus JCSC1435
Replicon chromosome
Start / Stop / Direction 56,104 / 54,914 / -
Location complement(54914..56104)
Type CDS
Length 1,191 bp (396 aa)

close this sectionAnnotation

Product similar to unknown protein
Gene name
Functional category Similar to unknown proteins
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionRelated links to external database

UniProtQ4LAH1
INSDBAE03354.1 (DDBJ GenBank EMBL)
RefSeqYP_251960.1
GI70725046
UniParcUPI000054B5CA

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0Q4LAH1_STAHJSimilar to unknown proteinAlignment
2E=0C5QAS0_STAEPMajor facilitator superfamily permeaseAlignment
3E=1e-142Q4LA64_STAHJSimilar to unknown proteinAlignment
4E=1e-140B9CVK7_STACPTransporter, major facilitator familyAlignment
5E=1e-136B9DJ45_STACTPutative uncharacterized proteinAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR007114 Major facilitator superfamily (Family)
 [9-387]  15.759 PS50850
PS50850   MFS
IPR010645 Protein of unknown function DUF1228 (Domain)
 [19-99]  4.7e-17 PF06779
PF06779   DUF1228
IPR011701 Major facilitator superfamily MFS-1 (Domain)
 [212-380]  2.2e-08 PF07690
PF07690   MFS_1
IPR011701 Major facilitator superfamily MFS_1 (Family)
 [212-380]  2.2e-08 PF07690
PF07690   MFS_1
IPR016196 Major facilitator superfamily, general substrate transporter (Domain)
 [1-387]  6.8e-43 SSF103473
SSF103473   MFS general substrate transporter
IPR020846 Major facilitator superfamily domain (Domain)
 [9-387]  15.759 PS50850
PS50850   MFS
SignalP 
 [1-26]  0.971 Signal
Bacteria, Gram-positive   
TMHMM 
 [9-31]  Transmembrane (i-o) [46-68]  Transmembrane (o-i) [75-97]  Transmembrane (i-o) [102-121]  Transmembrane (o-i) [134-156]  Transmembrane (i-o) [160-182]  Transmembrane (o-i) [207-229]  Transmembrane (i-o) [244-266]  Transmembrane (o-i) [273-290]  Transmembrane (i-o) [294-316]  Transmembrane (o-i) [329-351]  Transmembrane (i-o) [361-383]  Transmembrane (o-i)
Transmembrane 12   
SOSUI 
 [10-32]  Transmembrane [71-93]  Transmembrane [100-122]  Transmembrane [132-154]  Transmembrane [162-184]  Transmembrane [210-232]  Transmembrane [244-266]  Transmembrane [283-305]  Transmembrane [332-354]  Transmembrane [363-384]  Transmembrane
Transmembrane 10   

close this sectionCalculated information (Amino acid sequence)

size of protein 396 amino acids
molecular mass 44,319.04 Da
pI 9.65
aa composition
AlaValLeuIlePheTrpProMetGlySer
5.6
(22aa)		7.1
(28aa)		13.4
(53aa)		13.1
(52aa)		7.3
(29aa)		1.5
(6aa)		2
(8aa)		3.5
(14aa)		7.1
(28aa)		8.8
(35aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.8
(23aa)		0.3
(1aa)		3.8
(15aa)		2.5
(10aa)		5.3
(21aa)		6.3
(25aa)		0.5
(2aa)		1
(4aa)		1.8
(7aa)		3.3
(13aa)

open this sectionSequence