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CDS Information : SH0050

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close this sectionGenomic map

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Staphylococcus haemolyticus JCSC1435 chromosome

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Overview 
Genome

close this sectionLocation

Organism Staphylococcus haemolyticus JCSC1435
Replicon chromosome
Start / Stop / Direction 57,558 / 58,487 / +
Location 57558..58487
Type CDS
Length 930 bp (309 aa)

close this sectionAnnotation

Product hypothetical protein, similar to transcription regulator DeoR family
Gene name
Functional category Information pathways
- RNA synthesis
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Staphylococcus epidermidis ATCC 12228Staphylococcus epidermidis RP62A

close this sectionRelated links to external database

UniProtQ4LAG6
INSDBAE03359.1 (DDBJ GenBank EMBL)
RefSeqYP_251965.1
GI70725051
UniParcUPI000054B5CF

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-175B0I331_STAAUPutative uncharacterized proteinAlignment
2E=1e-175Q4LAG6_STAHJSimilar to transcription regulator DeoR familyAlignment
3E=1e-175Q3T2N0_STAAUPutative uncharacterized proteinAlignment
4E=1e-175D2N385_STAAUHTH domain familyAlignment
5E=1e-175C5QAS3_STAEPTranscriptional regulatorAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR013196 Helix-turn-helix, type 11 (Domain)
 [6-60]  3.4e-11 PF08279
PF08279   HTH_11
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 309 amino acids
molecular mass 36,194.60 Da
pI 7.18
aa composition
AlaValLeuIlePheTrpProMetGlySer
2.9
(9aa)		5.2
(16aa)		9.1
(28aa)		10.7
(33aa)		4.5
(14aa)		0.6
(2aa)		1.3
(4aa)		3.2
(10aa)		3.9
(12aa)		6.5
(20aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
4.2
(13aa)		1
(3aa)		11.3
(35aa)		4.2
(13aa)		6.5
(20aa)		10
(31aa)		0.3
(1aa)		2.3
(7aa)		3.9
(12aa)		8.4
(26aa)

open this sectionSequence