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CDS Information : SH0124

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close this sectionGenomic map

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Staphylococcus haemolyticus JCSC1435 chromosome

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Overview 
Genome

close this sectionLocation

Organism Staphylococcus haemolyticus JCSC1435
Replicon chromosome
Start / Stop / Direction 124,892 / 124,014 / -
Location complement(124014..124892)
Type CDS
Length 879 bp (292 aa)

close this sectionAnnotation

Product hypothetical protein, similar to cobalamin synthesis related protein CobW
Gene name
Functional category Intermediary metabolism
- Metabolism of coenzymes and prosthetic groups
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Staphylococcus epidermidis ATCC 12228Staphylococcus epidermidis RP62A
[188] SE0188 6e-120(422)
cobalamin synthesis related protein CobW
[2332] SERP2386 7e-120(422)
cobalamin synthesis protein, putative

close this sectionRelated links to external database

UniProtQ4LA92
INSDBAE03433.1 (DDBJ GenBank EMBL)
RefSeqYP_252039.1
GI70725125
UniParcUPI000054B613

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-169Q4LA92_STAHJSimilar to cobalamin synthesis related protein CobWAlignment
2E=1e-120C5QZ49_STAEPCobalamin (Vitamin B12) biosynthesis proteinAlignment
3E=1e-116Q8CQD6_STAESCobalamin synthesis related protein CobWAlignment
4E=1e-116Q5HKF9_STAEQCobalamin synthesis protein, putativeAlignment
5E=1e-116D1WPS1_STAEPCobW/P47K family proteinAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR003495 Cobalamin (vitamin B12) biosynthesis CobW-like (Domain)
 [3-180]  8.50000000000004e-35 PF02492
PF02492   cobW
IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal (Domain)
 [211-292]  2.00000006595059 SM00833
SM00833   CobW_C
 [211-290]  3.4e-08 SSF90002
SSF90002   Cbl_biosynth_CobW-like_C
 [218-290]  1e-06 PF07683
PF07683   CobW_C
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 292 amino acids
molecular mass 32,843.11 Da
pI 5.71
aa composition
AlaValLeuIlePheTrpProMetGlySer
6.2
(18aa)		6.8
(20aa)		13
(38aa)		11
(32aa)		3.4
(10aa)		0.3
(1aa)		3.8
(11aa)		1.4
(4aa)		4.8
(14aa)		4.5
(13aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
6.2
(18aa)		2.1
(6aa)		3.8
(11aa)		5.8
(17aa)		2.7
(8aa)		4.8
(14aa)		4.1
(12aa)		3.4
(10aa)		5.8
(17aa)		6.2
(18aa)

open this sectionSequence