DOGAN: CDS Information : SH0128

Display

Staphylococcus haemolyticus JCSC1435 chromosome

Overview
Genome

Center position		change
ID		change
Gene name		change

Genome	Display	Sync
chromosome

Organism	Staphylococcus haemolyticus JCSC1435
Replicon	chromosome
Start / Stop / Direction	126,750 / 128,120 / +
Location	126750..128120
Type	CDS
Length	1,371 bp (456 aa)

Product	no similarity
Gene name
Functional category	No similarity
EC number
Note
KEGG pathway
Sequence feature
References

Table

Display	BBH1e-1001e-501e-101e-3

Staphylococcus epidermidis ATCC 12228	Staphylococcus epidermidis RP62A
[1543] SE1543 0.001(37.7) V8 protease	[2346] SERP2401 2e-05(43.1) serine protease [1364] SERP1397 0.001(37.4) glutamyl endopeptidase precursor SspA (EC:3.4.21.19)(sspA)

UniProt	Q4LA88
INSD	BAE03437.1 (DDBJ GenBank EMBL)
RefSeq	YP_252043.1
GI	70725129
UniParc	UPI000054B617

BLASTP
Database:UniProtKB:2010_04

show BLAST table

1	E=0	Q4LA88_STAHJ	Similarity	Alignment
2	E=1e-160	C5QP45_STAEP	Putative uncharacterized protein	Alignment
3	E=1e-132	B9DPY9_STACT	Putative uncharacterized protein	Alignment
4	E=3e-09	C4WB75_STAWA	Serine protease	Alignment
5	E=5e-09	C2LZM9_STAHO	Serine protease	Alignment

HAMAP

No significant hit

InterPro
Database:interpro:25.0

IPR001254 Peptidase S1 and S6, chymotrypsin/Hap (Domain)
	PF00089 Trypsin
IPR008353 Peptidase S1B, exfoliative toxin (Domain)
	PR01774 EXFOLTOXIN
IPR008353 Peptidase S1B, exfoliative toxin (Family)
	PR01774 EXFOLTOXIN
IPR009003 Peptidase, trypsin-like serine and cysteine (Domain)
	SSF50494 Pept_Ser_Cys

SignalP

Bacteria, Gram-positive

TMHMM

No significant hit

SOSUI

No significant hit

size of protein

456 amino acids

molecular mass

50,282.61 Da

pI

10.9

aa composition

Ala	Val	Leu	Ile	Phe	Trp	Pro	Met	Gly	Ser
7.5 (34aa)	8.1 (37aa)	3.7 (17aa)	4.4 (20aa)	1.5 (7aa)	0.4 (2aa)	5.3 (24aa)	3.1 (14aa)	5 (23aa)	9.6 (44aa)
Thr	Cys	Asn	Gln	Tyr	Lys	His	Arg	Asp	Glu
9.4 (43aa)	0.2 (1aa)	6.8 (31aa)	6.4 (29aa)	3.7 (17aa)	13.8 (63aa)	2.4 (11aa)	3.1 (14aa)	3.1 (14aa)	2.4 (11aa)

>SH0128 no similarity
ATGATGTGTTTATCTTTTCATTTTCAATTTAATGAAGCGAATGCTTCTACTAAAAGTGAT
AAATTAGATGTACAACAAACATCTCAACAACCTGTCGTTAAACAACAAAATAAGTCAGTA
AATGTATCTAAAGATAAAGTTGTAGCAACGCAGACTAAGGTACAAACGCCGTCTAAGGTA
ACAAATCGCAATCAAGCTTCGTTACAAAAGACAATGGCACCTTCTAAACGAGCACATGTT
ACTTCAACACATGTGACACCAAAAAGTACTAAAGTAAAACCTTCATCGCAAAACTTTTCA
AAACAAAAGCAACCAACTAAGGTTAACAAAAAAGTTGTCTCAACAAATAAAAAACCACAA
AAAGCATCAAAAGTAACACGCACGCAATCCGCGAGACCACAGTTATTAGCGCAAACTACT
AAAACAAGAAGTAAGCCAACTTCGTCAAAAGTATCGGCAAGTAAACCATCTACGAAAGTG
GCAGTTGTAACTAAGTCTAAAACTGCGAAACCAAGTGCACAAACAACAGTCAAAGCGTCT
AAAAAAGCATCATCAACGACGAAGAAGAATTATTACAATCAAGCACCTAAGCGTTGGCCA
TCTAATGTGCCTGGTGGTGATAATGTACGTGATTTCGGTCAAACGACGAAAGAATCAGGT
ATTGATGACGCCTTAAAAATTATGAAGAAATCAGGAAACAAAGGTGTAACCATTGAACAT
GCTAAGGCGAAAGATGCCAATATCGCAACAGTTTATAATTGGAATCCAAAAGCAAAACAA
TTAACATATGGCACTGGTACAGCAATTGGAAAGCATACGATTCTAACTGCAAATCATGTT
GTAAATGATCAAAGTGCGCATAAGCCTTTGACACCGTCACAACCACAAAATATGCGTATC
AACATATTACAAGAGGGATCTAAAATTGTGCGTACACTTGAAGTCTTTGGTGTTCAAATG
TTGCAATATGGTGATGTTTCTCTAGTGTATACGTATGAAGATATTTCAAAGTATATGAAG
ATAAGAAAGATTGCATCAGAAAGTTCAATTAAAGCAATGAAAGCAAATACGCCTATTCAC
ATGTACCATTATGGTAAGCCGACTGGTAAATATAAAAATGATCCTGCCGGTACAATGTAT
CATTCAAAAGGGAAATATACGATGCCTGCACGTAATGTGAACCCGATTGGCTATTATCAA
ATGATGGCTGAACCAGGTTCTTCTGGTGGGGCAGTCTTAAATAGTAAAAATGAAGTCATT
GGTGTCCATGCGTTCCGATTAAACTCAGGAGATTATAAAAAATATAATTTAAATACGATG
GCTGAAATCAGAGGTAAATTACGTAAAGAAATTATTGATAATATTGTGTAG


>SH0128 no similarity
MMCLSFHFQFNEANASTKSDKLDVQQTSQQPVVKQQNKSVNVSKDKVVATQTKVQTPSKV
TNRNQASLQKTMAPSKRAHVTSTHVTPKSTKVKPSSQNFSKQKQPTKVNKKVVSTNKKPQ
KASKVTRTQSARPQLLAQTTKTRSKPTSSKVSASKPSTKVAVVTKSKTAKPSAQTTVKAS
KKASSTTKKNYYNQAPKRWPSNVPGGDNVRDFGQTTKESGIDDALKIMKKSGNKGVTIEH
AKAKDANIATVYNWNPKAKQLTYGTGTAIGKHTILTANHVVNDQSAHKPLTPSQPQNMRI
NILQEGSKIVRTLEVFGVQMLQYGDVSLVYTYEDISKYMKIRKIASESSIKAMKANTPIH
MYHYGKPTGKYKNDPAGTMYHSKGKYTMPARNVNPIGYYQMMAEPGSSGGAVLNSKNEVI
GVHAFRLNSGDYKKYNLNTMAEIRGKLRKEIIDNIV

CDS Information : SH0128

Genomic map

Staphylococcus haemolyticus JCSC1435 chromosome

Location

Annotation

Comparative genome

Related links to external database

Computational search results

Calculated information (Amino acid sequence)

Sequence