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CDS Information : SH0916

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close this sectionGenomic map

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Staphylococcus haemolyticus JCSC1435 chromosome

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Overview 
Genome

close this sectionLocation

Organism Staphylococcus haemolyticus JCSC1435
Replicon chromosome
Start / Stop / Direction 924,138 / 924,737 / +
Location 924138..924737
Type CDS
Length 600 bp (199 aa)

close this sectionAnnotation

Product thymidine kinase
Gene name tdk
Functional category Intermediary metabolism
- Metabolism of nucleotides and nucleic acids
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Display BBH1e-1001e-501e-101e-3
Staphylococcus epidermidis ATCC 12228Staphylococcus epidermidis RP62A
[1717] SE1717 2e-101(360)
thymidine kinase (EC:2.7.1.21)
[1688] SERP1726 2e-101(360)
thymidine kinase (EC:2.7.1.21)(tdk)

close this sectionRelated links to external database

UniProtQ4L800
INSDBAE04225.1 (DDBJ GenBank EMBL)
RefSeqYP_252831.1
GI70725917
UniParcUPI000054B91B

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-113KITH_STAHJThymidine kinaseAlignment
2E=1e-105C2LXF5_STAHOThymidine kinaseAlignment
3E=1e-102C5QLE6_STAEPThymidine kinaseAlignment
4E=1e-102B9CU28_STACPThymidine kinaseAlignment
5E=1e-100C8MBZ4_STAAUThymidine kinaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR001267 Thymidine kinase (Family)
 [174-187]  PS00603
PS00603   TK_CELLULAR_TYPE
 [8-187]  8.1e-55 PF00265
PF00265   TK
 [7-199]  5.10003242202155e-88 PIRSF035805
PIRSF035805   TK_cell
IPR020633 Thymidine kinase, conserved site (Conserved_site)
 [174-187]  PS00603
PS00603   TK_CELLULAR_TYPE
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 199 amino acids
molecular mass 22,358.38 Da
pI 4.87
aa composition
AlaValLeuIlePheTrpProMetGlySer
6
(12aa)
9.5
(19aa)
5.5
(11aa)
9
(18aa)
3
(6aa)
0.5
(1aa)
4
(8aa)
3
(6aa)
6
(12aa)
8
(16aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
3
(6aa)
2
(4aa)
2.5
(5aa)
4
(8aa)
2.5
(5aa)
5
(10aa)
3.5
(7aa)
6
(12aa)
7
(14aa)
9.5
(19aa)

open this sectionSequence