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CDS Information : SH1422

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close this sectionGenomic map

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Staphylococcus haemolyticus JCSC1435 chromosome

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Overview 
Genome

close this sectionLocation

Organism Staphylococcus haemolyticus JCSC1435
Replicon chromosome
Start / Stop / Direction 1,448,607 / 1,449,146 / +
Location 1448607..1449146
Type CDS
Length 540 bp (179 aa)

close this sectionAnnotation

Product similar to unknown protein
Gene name
Functional category Similar to unknown proteins
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Staphylococcus epidermidis ATCC 12228Staphylococcus epidermidis RP62A
[1178] SE1178 1e-66(244)
hypothetical protein
[1032] SERP1057 1e-66(244)
segregation and condensation protein B(scpB)

close this sectionRelated links to external database

UniProtQ4L6J4
INSDBAE04731.1 (DDBJ GenBank EMBL)
RefSeqYP_253337.1
GI70726423
UniParcUPI000054BB06

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=3e-97SCPB_STAHJSegregation and condensation protein BAlignment
2E=4e-77C4WA66_STAWASegregation and condensation protein BAlignment
3E=8e-77B9CS44_STACPSegregation and condensation protein BAlignment
4E=3e-75D2USB2_STAAUSegregation and condensation protein BAlignment
5E=3e-75D2GRP4_STAAUSegregation and condensation protein BAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR005234 Prokaryotic chromosome segregation and condensation protein ScpB (Family)
 [2-178]  1.29999924468179e-26 TIGR00281
TIGR00281   ScpB
 [1-179]  1.10000150671642e-28 PIRSF019345
PIRSF019345   ScpB
 [6-156]  1e-38 PF04079
PF04079   DUF387
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 179 amino acids
molecular mass 20,005.52 Da
pI 4.2
aa composition
AlaValLeuIlePheTrpProMetGlySer
5.6
(10aa)		2.2
(4aa)		12.3
(22aa)		10.6
(19aa)		2.8
(5aa)		0
(0aa)		1.7
(3aa)		2.2
(4aa)		5.6
(10aa)		10.1
(18aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
6.1
(11aa)		0
(0aa)		4.5
(8aa)		5
(9aa)		2.8
(5aa)		6.7
(12aa)		1.1
(2aa)		2.8
(5aa)		6.7
(12aa)		11.2
(20aa)

open this sectionSequence