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CDS Information : SH2261

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close this sectionGenomic map

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Staphylococcus haemolyticus JCSC1435 chromosome

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Overview 
Genome

close this sectionLocation

Organism Staphylococcus haemolyticus JCSC1435
Replicon chromosome
Start / Stop / Direction 2,297,383 / 2,298,126 / +
Location 2297383..2298126
Type CDS
Length 744 bp (247 aa)

close this sectionAnnotation

Product similar to unknown protein
Gene name
Functional category Similar to unknown proteins
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Staphylococcus epidermidis ATCC 12228Staphylococcus epidermidis RP62A
[409] SE0409 6e-81(293)
hypothetical protein
[289] SERP0294 6e-81(292)
hypothetical protein

close this sectionRelated links to external database

UniProtQ4L457
INSDBAE05570.1 (DDBJ GenBank EMBL)
RefSeqYP_254176.1
GI70727260
UniParcUPI000054BE30

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-136Q4L457_STAHJSimilar to unknown proteinAlignment
2E=7e-96C5QQ04_STAEPPutative uncharacterized proteinAlignment
3E=2e-90Q8CTM5_STAESPutative uncharacterized proteinAlignment
4E=5e-90Q5HR99_STAEQPutative uncharacterized proteinAlignment
5E=5e-90D1WJN8_STAEPPutative membrane proteinAlignment
HAMAP No significant hit
InterPro No significant hit
SignalP No significant hit
TMHMM 
 [10-29]  Transmembrane (o-i) [95-117]  Transmembrane (i-o) [121-143]  Transmembrane (o-i) [148-166]  Transmembrane (i-o) [171-193]  Transmembrane (o-i) [224-246]  Transmembrane (i-o)
Transmembrane 6   
SOSUI 
 [10-31]  Transmembrane [96-118]  Transmembrane [125-145]  Transmembrane [148-170]  Transmembrane [173-195]  Transmembrane [222-244]  Transmembrane
Transmembrane 6   

close this sectionCalculated information (Amino acid sequence)

size of protein 247 amino acids
molecular mass 28,769.41 Da
pI 9.44
aa composition
AlaValLeuIlePheTrpProMetGlySer
3.2
(8aa)		4.5
(11aa)		16.2
(40aa)		15
(37aa)		7.7
(19aa)		1.2
(3aa)		3.6
(9aa)		2.4
(6aa)		5.3
(13aa)		4.9
(12aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
8.1
(20aa)		0.4
(1aa)		3.6
(9aa)		4.9
(12aa)		6.9
(17aa)		2
(5aa)		2.8
(7aa)		3.6
(9aa)		1.6
(4aa)		2
(5aa)

open this sectionSequence