DOGAN: CDS Information : SH2267

Display

Staphylococcus haemolyticus JCSC1435 chromosome

Overview
Genome

Center position		change
ID		change
Gene name		change

Genome	Display	Sync
chromosome

Organism	Staphylococcus haemolyticus JCSC1435
Replicon	chromosome
Start / Stop / Direction	2,304,343 / 2,303,171 / -
Location	complement(2303171..2304343)
Type	CDS
Length	1,173 bp (390 aa)

Product	transposase for IS256
Gene name	tnp
Functional category	Other functions - Transposon and IS
EC number
Note
KEGG pathway
Sequence feature
References

Table

Display	BBH1e-1001e-501e-101e-3

Staphylococcus epidermidis ATCC 12228	Staphylococcus epidermidis RP62A
	[1965] SERP2011 0(810) IS256-like transposase [1550] SERP1587 0(810) IS256-like transposase [1547] SERP1584 0(810) IS256-like transposase [1230] SERP1259 0(810) IS256-like transposase [892] SERP0915 0(810) IS256-like transposase

UniProt	Q4L9M7
INSD	BAE05576.1 (DDBJ GenBank EMBL)
RefSeq	YP_254182.1
GI	70727266
UniParc	UPI0000001098

BLASTP
Database:UniProtKB:2010_04

show BLAST table

1	E=0	Q5HPJ6_STAEQ	IS256-like transposase	Alignment
2	E=0	Q4L9M7_STAHJ	Transposase for IS256	Alignment
3	E=0	D1GMD0_STAA0	IS256 transposase	Alignment
4	E=0	Q7DI55_STAEP	IS256, transposase IS256 transposase	Alignment
5	E=0	Q7DHL0_STAAU	IS256, transposase IS256 transposase Putative transposase Transposase for insertion sequence element IS256 Transposase for insertion sequence element IS256 in transposon Tn4001	Alignment

HAMAP

No significant hit

InterPro
Database:interpro:25.0

IPR001207 Transposase, mutator type (Family)
	PS01007 TRANSPOSASE_MUTATOR
	PF00872 Transposase_mut

SignalP

No significant hit

TMHMM

No significant hit

SOSUI

No significant hit

size of protein

390 amino acids

molecular mass

45,673.90 Da

pI

9.38

aa composition

Ala	Val	Leu	Ile	Phe	Trp	Pro	Met	Gly	Ser
3.6 (14aa)	6.4 (25aa)	7.4 (29aa)	7.2 (28aa)	4.9 (19aa)	1 (4aa)	1.8 (7aa)	2.3 (9aa)	4.1 (16aa)	8.7 (34aa)
Thr	Cys	Asn	Gln	Tyr	Lys	His	Arg	Asp	Glu
6.7 (26aa)	1 (4aa)	5.6 (22aa)	4.9 (19aa)	4.1 (16aa)	7.4 (29aa)	2.1 (8aa)	7.7 (30aa)	4.1 (16aa)	9 (35aa)

>SH2267 transposase for IS256
ATGACCCAAGTACATTTTACACTGAAAAGCGAAGAGATTCAAAGCATTATTGAATATTCT
GTAAAGGATGACGTTTCTAAAAATATTTTAACAACGGTATTTAATCAACTAATGGAAAAT
CAACGAACAGAATATATTCAAGCAAAAGAATATGAACGAACAGAAAACCGACAAAGTCAA
CGAAATGGCTATTATGAGCGCAGCTTTACGACACGTGTAGGCACGCTAGAATTAAAAGTA
CCCAGAACACGTGATGGCCATTTTTCACCCACAGTGTTTGAACGTTATCAACGAAACGAA
AAAGCCCTCATGGCTTCAATGTTGGAAATGTATGTATCAGGCGTTTCAACTCGTAAAGTA
TCAAAAATTGTGGAAGAACTTTGTGGTAAATCCGTCTCTAAGTCCTTCGTTTCTAGCTTA
ACAGAACAGCTAGAACCTATGGTTAACGAGTGGCAGAATCGTTTATTATCAGAAAAAAAT
TATCCTTACTTAATGACCGATGTACTCTATATAAAAGTACGAGAAGAAAATCGAGTACTC
TCAAAAAGCTGTCATATAGCGATTGGAATAACCAAAGATGGCGACCGTGAAATTATCGGC
TTCATGATTCAAAGTGGCGAAAGCGAAGAGACCTGGACAACATTTTTTGAATACCTAAAA
GAACGCGGTTTACAAGGTACGGAACTCGTTATTTCTGATGCGCACAAAGGATTAGTCTCT
GCCATTAGAAAATCCTTCACCAACGTAAGTTGGCAAAGATGCCAAGTTCACTTCCTAAGA
AATATCTTTACCACCATTCCTAAAAAAAATTCAAAATCTTTCAGAGAAGCTGTTAAAGGA
ATTTTTAAGTTCACAGATATTAACTTAGCGCGTGAGGCTAAAAATCGATTGATTCATGAT
TATATCGATCAACCAAAATATTCAAAAGCTTGCGCATCATTGGATGATGGATTCGAAGAC
GCCTTTCAATATACCGTACAAGGAAATTCCCACAATCGACTAAAGAGTACCAATCTAATT
GAACGACTGAATCAAGAAGTACGCAGAAGAGAAAAGATTATTCGCATCTTCCCCAATCAA
ACATCAGCCAATCGCTTAATTGGAGCCGTTCTTATGGACCTACATGATGAATGGATTTAT
TCTTCAAGAAAATACATCAATTTTGATAAGTAG


>SH2267 transposase for IS256
MTQVHFTLKSEEIQSIIEYSVKDDVSKNILTTVFNQLMENQRTEYIQAKEYERTENRQSQ
RNGYYERSFTTRVGTLELKVPRTRDGHFSPTVFERYQRNEKALMASMLEMYVSGVSTRKV
SKIVEELCGKSVSKSFVSSLTEQLEPMVNEWQNRLLSEKNYPYLMTDVLYIKVREENRVL
SKSCHIAIGITKDGDREIIGFMIQSGESEETWTTFFEYLKERGLQGTELVISDAHKGLVS
AIRKSFTNVSWQRCQVHFLRNIFTTIPKKNSKSFREAVKGIFKFTDINLAREAKNRLIHD
YIDQPKYSKACASLDDGFEDAFQYTVQGNSHNRLKSTNLIERLNQEVRRREKIIRIFPNQ
TSANRLIGAVLMDLHDEWIYSSRKYINFDK

CDS Information : SH2267

Genomic map

Staphylococcus haemolyticus JCSC1435 chromosome

Location

Annotation

Comparative genome

Related links to external database

Computational search results

Calculated information (Amino acid sequence)

Sequence