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CDS Information : SH2272

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close this sectionGenomic map

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Staphylococcus haemolyticus JCSC1435 chromosome

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Overview 
Genome

close this sectionLocation

Organism Staphylococcus haemolyticus JCSC1435
Replicon chromosome
Start / Stop / Direction 2,307,876 / 2,306,377 / -
Location complement(2306377..2307876)
Type CDS
Length 1,500 bp (499 aa)

close this sectionAnnotation

Product formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit
Gene name mnhD
Functional category Cell envelope and cellular processes
- Membrane bioenergetics (electron transport chain and ATP synthase)
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Staphylococcus epidermidis ATCC 12228Staphylococcus epidermidis RP62A
[400] SE0400 0(751)
putative monovalent cation/H+ antiporter subunit D
[279] SERP0284 0(751)
putative monovalent cation/H+ antiporter subunit D

close this sectionRelated links to external database

UniProtQ4L446
INSDBAE05581.1 (DDBJ GenBank EMBL)
RefSeqYP_254187.1
GI70727271
UniParcUPI000054BE3A

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0MNHD2_STAHJPutative antiporter subunit mnhD2
Mrp complex subunit D2		Alignment
2E=0C5QPZ3_STAEPCPA3 family monovalent cation (K+ or Na+):proton (H+) antiporter-3, MnhD subunitAlignment
3E=0C4W9Z1_STAWANADH-Ubiquinone/plastoquinone, various chainsAlignment
4E=0B9CR99_STACPNa+/H+ antiporter subunitAlignment
5E=0C2LYR7_STAHOPutative membrane proteinAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR001750 NADH/Ubiquinone/plastoquinone (complex I) (Domain)
 [128-398]  4.39999999999997e-44 PF00361
PF00361   Oxidored_q1
IPR003918 NADH-ubiquinone oxidoreductase, chain 4 (Family)
 [133-152]  2.70000183580794e-11 PR01437 [163-187]  2.70000183580794e-11 PR01437 [234-258]  2.70000183580794e-11 PR01437 [322-341]  2.70000183580794e-11 PR01437 [374-400]  2.70000183580794e-11 PR01437
PR01437   NUOXDRDTASE4
SignalP 
 [1-23]  0.799 Signal
Bacteria, Gram-positive   
TMHMM 
 [5-23]  Transmembrane (o-i) [32-54]  Transmembrane (i-o) [77-99]  Transmembrane (o-i) [106-128]  Transmembrane (i-o) [133-152]  Transmembrane (o-i) [159-181]  Transmembrane (i-o) [206-228]  Transmembrane (o-i) [235-257]  Transmembrane (i-o) [270-292]  Transmembrane (o-i) [299-321]  Transmembrane (i-o) [326-348]  Transmembrane (o-i) [368-390]  Transmembrane (i-o) [405-427]  Transmembrane (o-i) [451-473]  Transmembrane (i-o)
Transmembrane 14   
SOSUI 
 [3-24]  Transmembrane [31-53]  Transmembrane [76-98]  Transmembrane [109-131]  Transmembrane [134-156]  Transmembrane [160-182]  Transmembrane [203-225]  Transmembrane [239-261]  Transmembrane [272-294]  Transmembrane [299-321]  Transmembrane [326-348]  Transmembrane [372-394]  Transmembrane [407-429]  Transmembrane [451-473]  Transmembrane
Transmembrane 14   

close this sectionCalculated information (Amino acid sequence)

size of protein 499 amino acids
molecular mass 54,967.88 Da
pI 9.2
aa composition
AlaValLeuIlePheTrpProMetGlySer
7.6
(38aa)		9.6
(48aa)		14.8
(74aa)		9.6
(48aa)		8
(40aa)		0.6
(3aa)		2.8
(14aa)		3.8
(19aa)		8.2
(41aa)		5.4
(27aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5
(25aa)		0.8
(4aa)		4.4
(22aa)		2
(10aa)		4.2
(21aa)		4.2
(21aa)		1.6
(8aa)		2.2
(11aa)		2.8
(14aa)		2.2
(11aa)

open this sectionSequence