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CDS Information : SH2279

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close this sectionGenomic map

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Staphylococcus haemolyticus JCSC1435 chromosome

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Overview 
Genome

close this sectionLocation

Organism Staphylococcus haemolyticus JCSC1435
Replicon chromosome
Start / Stop / Direction 2,312,520 / 2,313,446 / +
Location 2312520..2313446
Type CDS
Length 927 bp (308 aa)

close this sectionAnnotation

Product similar to unknown protein
Gene name
Functional category Similar to unknown proteins
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Staphylococcus epidermidis ATCC 12228Staphylococcus epidermidis RP62A
[392] SE0392 3e-93(334)
hypothetical protein
[271] SERP0276 7e-90(322)
hypothetical protein

close this sectionRelated links to external database

UniProtQ4L439
INSDBAE05588.1 (DDBJ GenBank EMBL)
RefSeqYP_254194.1
GI70727278
UniParcUPI000054BE41

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-170Q4L439_STAHJSimilar to unknown proteinAlignment
2E=1e-134C2LY21_STAHOPutative membrane proteinAlignment
3E=1e-121C5QPY6_STAEPIntegral membrane proteinAlignment
4E=1e-110Q8CTN3_STAESPutative uncharacterized proteinAlignment
5E=1e-110D1WJQ4_STAEPPutative membrane proteinAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR006750 Protein of unknown function DUF606 (Family)
 [4-144]  2.89999999999999e-36 PF04657 [163-304]  1.5e-34 PF04657
PF04657   DUF606
SignalP No significant hit
TMHMM 
 [4-26]  Transmembrane (o-i) [33-54]  Transmembrane (i-o) [69-91]  Transmembrane (o-i) [98-120]  Transmembrane (i-o) [125-147]  Transmembrane (o-i) [160-182]  Transmembrane (i-o) [192-214]  Transmembrane (o-i) [235-257]  Transmembrane (i-o) [262-281]  Transmembrane (o-i) [288-307]  Transmembrane (i-o)
Transmembrane 10   
SOSUI 
 [1-23]  Transmembrane [32-54]  Transmembrane [72-94]  Transmembrane [99-121]  Transmembrane [128-150]  Transmembrane [157-179]  Transmembrane [194-216]  Transmembrane [234-256]  Transmembrane [292-308]  Transmembrane
Transmembrane 9   

close this sectionCalculated information (Amino acid sequence)

size of protein 308 amino acids
molecular mass 33,821.87 Da
pI 10.61
aa composition
AlaValLeuIlePheTrpProMetGlySer
5.8
(18aa)		6.5
(20aa)		14.6
(45aa)		12.7
(39aa)		10.1
(31aa)		1
(3aa)		3.2
(10aa)		4.2
(13aa)		10.4
(32aa)		5.2
(16aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
6.8
(21aa)		0.3
(1aa)		4.2
(13aa)		2.3
(7aa)		1.9
(6aa)		3.6
(11aa)		2.6
(8aa)		2.3
(7aa)		1.6
(5aa)		0.6
(2aa)

open this sectionSequence